RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CORO2AQ92828 525 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 RPEQ96AT9 228 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 NIPSNAP1Q9BPW8 284 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 PCDHB16Q9NRJ7 776 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 IL36RNQ9UBH0 155 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 IKZF2Q9UKS7 526 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 U3KQV3 271 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 STARD9Q9P2P6 4700 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 IGKV1-27A0A075B6S5 117 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 A0A1B0GTI1 187 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 FUOMA2VDF0 154 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 LINC01548A6NM66 108 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 PRR32B1ATL7 298 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 LOC110117498-PIK3R3F6TDL0 507 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 E2F6O75461 281 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 FRMD6-AS1P0C7T7 363 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 OR3A1P47881 315 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 INSL3P51460 131 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 PRR20EP86478 221 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 PRR20CP86479 221 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 PRR20DP86480 221 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 PRR20BP86481 221 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 PRR20AP86496 221 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 ROM1Q03395 351 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 CD300LDQ6UXZ3 194 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 SLC25A26Q70HW3 274 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 BBS1Q8NFJ9 593 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 OR4D6Q8NGJ1 314 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 TOMM40LQ969M1 308 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 TTTY10Q9BZA0 68 aa9.98□□□□□ -0.81
SS18-219ENST00000581570 SAMHD1Q9Y3Z3 626 aaKnown RBP9.98□□□□□ -0.81
SS18-219ENST00000581570 HYDINQ4G0P3 5121 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 DHRS7CA6NNS2 312 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 AP4M1O00189 453 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 CCRL2O00421 344 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 HMGN1P05114 100 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 MRPL3P09001 348 aaKnown RBP9.97□□□□□ -0.81
SS18-219ENST00000581570 CALCBP10092 127 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 MAGEA2P43356 314 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 GLIPR1P48060 266 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 FUT6P51993 359 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 GPR50Q13585 617 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 GINS1Q14691 196 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 UBE2V2Q15819 145 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 UTF1Q5T230 341 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 FAM27D1Q5T7N8 215 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 BCL2L15Q5TBC7 163 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 Q6ZSR3 168 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 Q8IYB0 196 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 ELMOD2Q8IZ81 293 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 OR10G2Q8NGC3 310 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 ASB17Q8WXJ9 295 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 HRASLS5Q96KN8 279 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 GON7Q9BXV9 100 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 MOB1AQ9H8S9 216 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 REEP1Q9H902 201 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 RBFOX1Q9NWB1 397 aaKnown RBP9.97□□□□□ -0.81
SS18-219ENST00000581570 OR52A1Q9UKL2 312 aa9.97□□□□□ -0.81
SS18-219ENST00000581570 DSCAML1Q8TD84 2053 aa9.96□□□□□ -0.81
SS18-219ENST00000581570 A0A087X0M5 115 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 A0A1B0GX30 115 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 SIRPB1O00241 398 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 ENTPD6O75354 484 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 SRSF10O75494 262 aaKnown RBP9.96□□□□□ -0.82
SS18-219ENST00000581570 ELANEP08246 267 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 SLC2A5P22732 501 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 NFYBP25208 207 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 PTGFRP43088 359 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 NPBWR2P48146 333 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 SNU13P55769 128 aaKnown RBP9.96□□□□□ -0.82
SS18-219ENST00000581570 CDC42P60953 191 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 AESQ08117 197 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 FOXE3Q13461 319 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 FHL3Q13643 280 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 APOFQ13790 326 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 ZNF146Q15072 292 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 OR2T5Q6IEZ7 315 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 FAM58AQ8N1B3 248 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 RNF152Q8N8N0 203 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 OR2T29Q8NH02 315 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 OR9G1Q8NH87 305 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 ISOC1Q96CN7 298 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 RNFT2Q96EX2 444 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 FEVQ99581 238 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 APOL4Q9BPW4 351 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 COPS3Q9UNS2 423 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 AMMECR1Q9Y4X0 333 aaPredicted RBP9.96□□□□□ -0.82
SS18-219ENST00000581570 TMEM14AQ9Y6G1 99 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 R4GMQ9 66 aa9.96□□□□□ -0.82
SS18-219ENST00000581570 TRBV2A0A0J9YWF9 115 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 A0A1W2PPI3 338 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 SH2D1BO14796 132 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 IGKV1D-33P01593 117 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 IGKV1-33P01594 117 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 HCKP08631 526 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 PRKACAP17612 351 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 BCL3P20749 454 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 PRDX6P30041 224 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 LINC01559Q495D7 138 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 SPIN3Q5JUX0 258 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms