RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 CLDN1O95832 211 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 GYPAP02724 150 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 CD74P04233 296 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 AKAIN1P0CW23 69 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 VSIG10L2P0DP72 767 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 PSG2P11465 335 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 AGAP20933 346 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 FUT3P21217 361 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 GLRA1P23415 457 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 SLC6A1P30531 599 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 APOBEC3AP31941 199 aaPredicted RBP5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 OR3A1P47881 315 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 SELENOVP59797 346 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 COL10A1Q03692 680 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 DYRK1AQ13627 763 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 IL13RA2Q14627 380 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 EFNB3Q15768 340 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 PNLIPRP3Q17RR3 467 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 SWI5Q1ZZU3 235 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 PAN3Q58A45 887 aaKnown RBP5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 NHLRC3Q5JS37 347 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 C1QTNF12Q5T7M4 302 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 HIST2H2BCQ6DN03 193 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 HOGA1Q86XE5 327 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 FAM90A1Q86YD7 464 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 C1orf174Q8IYL3 243 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 CADM3Q8N126 398 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 TPRX1Q8N7U7 411 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 SPERTQ8NA61 448 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 TMEM229BQ8NBD8 167 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 OR51S1Q8NGJ8 323 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 OR4K15Q8NH41 348 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 MRPL30Q8TCC3 161 aaKnown RBP5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 CCDC107Q8WV48 283 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 LRRC46Q96FV0 321 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 NUDT16L1Q9BRJ7 211 aaKnown RBP5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 CACNG6Q9BXT2 260 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 TMPRSS13Q9BYE2 586 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 LIME1Q9H400 295 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 CHMP1AQ9HD42 196 aaPredicted RBP5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 GCM1Q9NP62 436 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 NUDT15Q9NV35 164 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 ZNF222Q9UK12 451 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 POLDIP2Q9Y2S7 368 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 WIPI2Q9Y4P8 454 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 COL6A6A6NMZ7 2263 aa5.16□□□□□ -1.58
RNU4ATAC-201ENST00000580972 RP1L1Q8IWN7 2480 aaPredicted RBP5.15□□□□□ -1.58
RNU4ATAC-201ENST00000580972 IGKV1-6A0A0C4DH72 117 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 A6NNC1 897 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 OR2AT4A6NND4 320 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 SERPINE3A8MV23 424 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 B9A039 149 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 ARPC1BO15143 372 aaKnown RBP5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 SCGNO76038 276 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 TPPPO94811 219 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 KNG1P01042 644 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 LHBP01229 141 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 TCRBP04435 133 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 AMY2AP04746 511 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 CD55P08174 381 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 CSF1P09603 554 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 SCTP09683 121 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 GSTT2P0CG29 244 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 GSTT2BP0CG30 244 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 NAT1P18440 290 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 RCC1P18754 421 aaPredicted RBP5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 ANXA7P20073 488 aaKnown RBP5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 COL8A2P25067 703 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 COL8A1P27658 744 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 PRDX2P32119 198 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 CDKN1AP38936 164 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 GATA4P43694 442 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 GABRA2P47869 451 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 EDDM3AQ14507 147 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 MPV17LQ2QL34 196 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 SCGB2B2Q4G0G5 96 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 IGSF11Q5DX21 431 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 UTF1Q5T230 341 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 C11orf71Q6IPW1 123 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 MZT2BQ6NZ67 158 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 LYPD2Q6UXB3 125 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 ZNF782Q6ZMW2 699 aaPredicted RBP5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 SSX8Q7RTT4 187 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 MUC15Q8N387 334 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 FAM216BQ8N7L0 139 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 BEST4Q8NFU0 473 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 OR52B4Q8NGK2 314 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 OR13C8Q8NGS7 320 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 FAM222BQ8WU58 562 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 MRPS24Q96EL2 167 aaKnown RBP5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 COQ2Q96H96 371 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 CCL13Q99616 98 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 VRK1Q99986 396 aaPredicted RBP5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 OCSTAMPQ9BR26 566 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 SEC22CQ9BRL7 303 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 PARP12Q9H0J9 701 aaKnown RBP5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 C20orf85Q9H1P6 137 aa5.15□□□□□ -1.59
RNU4ATAC-201ENST00000580972 DPAGT1Q9H3H5 408 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms