RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GYG2O15488 501 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 UBCP0CG48 685 aaKnown RBP14.3□□□□□ -0.12
MKS1-209ENST00000580127 T-ENOLP0DO92 83 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 JUNBP17275 347 aaPredicted RBP14.3□□□□□ -0.12
MKS1-209ENST00000580127 PRKACAP17612 351 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 CDK2P24941 298 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 DAPP51397 102 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 CD69Q07108 199 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 C9orf152Q5JTZ5 239 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 OR4P4Q8NGL7 312 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 CORO2AQ92828 525 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 IL4I1Q96RQ9 567 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 RHOFQ9HBH0 211 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 PCDHB16Q9NRJ7 776 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 NBEAL2Q6ZNJ1 2754 aa14.3□□□□□ -0.12
MKS1-209ENST00000580127 IGKV1-27A0A075B6S5 117 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 PSPNO60542 156 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 CD24P25063 80 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 DUSP1P28562 367 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 POU3F4P49335 361 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 EFNB1P98172 346 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 DNAL1Q4LDG9 190 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 TMEM244Q5VVB8 128 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 TCF23Q7RTU1 214 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 FAM220AQ7Z4H9 259 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 BCDIN3DQ7Z5W3 292 aaKnown RBP14.29□□□□□ -0.12
MKS1-209ENST00000580127 TBX5Q99593 518 aa14.29□□□□□ -0.12
MKS1-209ENST00000580127 EXOSC4Q9NPD3 245 aaKnown RBP14.29□□□□□ -0.12
MKS1-209ENST00000580127 RBFOX1Q9NWB1 397 aaKnown RBP14.29□□□□□ -0.12
MKS1-209ENST00000580127 G3V2T6 193 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 H3BSH0 61 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 ZNF20P17024 532 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 BCL3P20749 454 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 SLC6A1P30531 599 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 TMED1Q13445 227 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 TCTEX1D4Q5JR98 221 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 LHFPL2Q6ZUX7 228 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 OR10H4Q8NGA5 316 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 RFKQ969G6 155 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 HMG20AQ9NP66 347 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 INPP5EQ9NRR6 644 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 GSTK1Q9Y2Q3 226 aa14.28□□□□□ -0.12
MKS1-209ENST00000580127 A0A1W2PQL4 384 aaPredicted RBP14.27□□□□□ -0.13
MKS1-209ENST00000580127 TCRBV3S1A0A5B6 114 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 PSMB11A5LHX3 300 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 ZAR1LA6NP61 321 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 BUB1B-PAK6H3BSN5 160 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 SIRPB1O00241 398 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 ENTPD6O75354 484 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 HTR1FP30939 366 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 PTGFRP43088 359 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 OR3A1P47881 315 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 NPBWR2P48146 333 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 SCN1BQ07699 218 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 PDZK1IP1Q13113 114 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 PRAMEF5Q5TYX0 476 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 UTS2BQ765I0 119 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 KCTD20Q7Z5Y7 419 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 ZDHHC13Q8IUH4 622 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 OSR2Q8N2R0 312 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 ZNF565Q8N9K5 539 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 CHST4Q8NCG5 386 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 BCAS4Q8TDM0 211 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 SPSB1Q96BD6 273 aa14.27□□□□□ -0.13
MKS1-209ENST00000580127 AMMECR1Q9Y4X0 333 aaPredicted RBP14.27□□□□□ -0.13
MKS1-209ENST00000580127 LOC107986453A0A1B0GWG9 222 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 MMP23AO75900 390 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 OR2H2O95918 312 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 IGLV1-47P01700 117 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 ATF1P18846 271 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 CD34P28906 385 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 SNU13P55769 128 aaKnown RBP14.26□□□□□ -0.13
MKS1-209ENST00000580127 EGFEM1PQ0D2K5 195 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 RBM39Q14498 530 aaKnown RBP14.26□□□□□ -0.13
MKS1-209ENST00000580127 TPTE2P1Q5T6R2 138 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 C12orf73Q69YU5 71 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 THNSL2Q86YJ6 484 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 CHPT1Q8WUD6 406 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 WWC2-AS2Q96NR7 200 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 ZNF649Q9BS31 505 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 ZFP57Q9NU63 452 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 OR6C3Q9NZP0 311 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 GNG8Q9UK08 70 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 HHLA2Q9UM44 414 aa14.26□□□□□ -0.13
MKS1-209ENST00000580127 WI2-2373I1.2A0A1W2PRP0 233 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 ODAMA1E959 279 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 ZNF729A6NN14 1252 aaPredicted RBP14.25□□□□□ -0.13
MKS1-209ENST00000580127 RPSAP08865 295 aaKnown RBP14.25□□□□□ -0.13
MKS1-209ENST00000580127 ZNF44P15621 663 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 LMO1P25800 156 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 OR3A4PP47883 348 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 GP2P55259 537 aaKnown RBP14.25□□□□□ -0.13
MKS1-209ENST00000580127 KRTAP10-11P60412 298 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 SLC35B1P78383 322 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 AESQ08117 197 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 HLA-DRB5Q30154 266 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 KRBOX4Q5JUW0 171 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 SSX6Q7RTT6 188 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 COMMD1Q8N668 190 aa14.25□□□□□ -0.13
MKS1-209ENST00000580127 UTP4Q969X6 686 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms