RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 NUFIP1Q9UHK0 495 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-213ENST00000579605 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.31□□□□□ -0.76
CDK5RAP3-213ENST00000579605 GTF2A1LQ9UNN4 478 aa10.31□□□□□ -0.76
CDK5RAP3-213ENST00000579605 SLC22A13Q9Y226 551 aa10.31□□□□□ -0.76
CDK5RAP3-213ENST00000579605 POLDIP2Q9Y2S7 368 aa10.31□□□□□ -0.76
CDK5RAP3-213ENST00000579605 SIRT4Q9Y6E7 314 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-213ENST00000579605 KIAA1109Q2LD37 5005 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 CCDC182A6NF36 153 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 H3BSH0 61 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 NOS1APO75052 506 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 FAM106CPP0CH98 169 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 POU3F4P49335 361 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 ACTR3P61158 418 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 MFGE8Q08431 387 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 HES1Q14469 280 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 PNLIPRP3Q17RR3 467 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 CXorf66Q5JRM2 361 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 CLVS2Q5SYC1 327 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 ASRGL1Q7L266 308 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 FOXRED2Q8IWF2 684 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 DRAM1Q8N682 238 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 OR11H1Q8NG94 326 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 CNN2Q99439 309 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 ISYNA1Q9NPH2 558 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 COPS3Q9UNS2 423 aa10.3□□□□□ -0.76
CDK5RAP3-213ENST00000579605 hADV38S2A0JD32 116 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 PRR32B1ATL7 298 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 LOC110117498-PIK3R3F6TDL0 507 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 DLGAP1O14490 977 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 SAP30O75446 220 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 TTRP02766 147 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 IFNA6P05013 189 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 T-ENOLP0DO92 83 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 MNDAP41218 407 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 CDX1P47902 265 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 CRISP1P54107 249 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 RBM39Q14498 530 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 BCL2L15Q5TBC7 163 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 ZNF429Q86V71 674 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 SPATA24Q86W54 205 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 C5orf56Q8N8D9 126 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 NRIP2Q9BQI9 281 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 MOB1AQ9H8S9 216 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 DNAJB9Q9UBS3 223 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 OR52A1Q9UKL2 312 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 R4GMQ9 66 aa10.29□□□□□ -0.76
CDK5RAP3-213ENST00000579605 PQLC2LA1A4F0 135 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 FKBP6O75344 327 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 BDH1Q02338 343 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 MEF2CQ06413 473 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 GPR50Q13585 617 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 PRAMEF5Q5TYX0 476 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 TMEM42Q69YG0 159 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 ZNF322Q6U7Q0 402 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 TRAPPC6BQ86SZ2 158 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 SATL1Q86VE3 508 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 CCDC197Q8NCU1 140 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 IL17DQ8TAD2 202 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 ZNF596Q8TC21 504 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 DNAJC9Q8WXX5 260 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 APOL4Q9BPW4 351 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 SPATA25Q9BR10 227 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 PRRG3Q9BZD7 231 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 H2AFY2Q9P0M6 372 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 V9GYS6 101 aa10.28□□□□□ -0.76
CDK5RAP3-213ENST00000579605 FAM230AA0A1W2PPH8 454 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 A6NIN4 97 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 ZNF670-ZNF695F2Z2N8 137 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 CCRL2O00421 344 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 TOR1AO14656 332 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 MAGEB4O15481 346 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 PRKYO43930 277 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 INMTO95050 263 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 IGHG2P01859 326 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 TMEM11P17152 192 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 CEACAM3P40198 252 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 CXCR4P61073 352 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 ANGPTL5Q86XS5 388 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 SLC35F2Q8IXU6 374 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 ELMOD2Q8IZ81 293 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 OR14K1Q8NGZ2 314 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 LINC00476Q8WZB0 136 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 MNTQ99583 582 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 PKIBQ9C010 78 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 HES4Q9HCC6 221 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 SLC7A11Q9UPY5 501 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 SNX5Q9Y5X3 404 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 LINC00312Q9Y6C7 94 aa10.27□□□□□ -0.77
CDK5RAP3-213ENST00000579605 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 ZNF737O75373 536 aa10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 SRSF10O75494 262 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 MPZP25189 248 aa10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 GABPB1Q06547 395 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 IL24Q13007 206 aa10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 FHL3Q13643 280 aa10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 FLOT2Q14254 428 aa10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 PTGES3Q15185 160 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-213ENST00000579605 PLEKHG7Q6ZR37 379 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms