RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 RBFOX1Q9NWB1 397 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TXNL4BQ9NX01 149 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 CHCHD3Q9NX63 227 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 RCC2Q9P258 522 aaKnown RBP3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 OPN4Q9UHM6 478 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 ITGB1BP2Q9UKP3 347 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 EDARQ9UNE0 448 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 STUB1Q9UNE7 303 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 PPIAL4AQ9Y536 164 aa3.13□□□□□ -1.91
SMARCE1-215ENST00000578995 TRAV24A0A0B4J272 114 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 PPIAL4CA0A0B4J2A2 164 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 FAM230AA0A1W2PPH8 454 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 A6NLC8 198 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 OR2AT4A6NND4 320 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM14DPA8MWL7 114 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC17A2O00624 439 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 SIGLEC5O15389 551 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 PPIHO43447 177 aaKnown RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CD5LO43866 347 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CDRT1O95170 752 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 LY6G6DO95868 133 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 KNG1P01042 644 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 GYPAP02724 150 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CD2P06729 351 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 ERCC1P07992 297 aaPredicted RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CLEC2LP0C7M8 214 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 HSMCR30P0CW71 290 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CGB3P0DN86 165 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CGB7P0DN87 165 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 MMP9P14780 707 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 MUC1P15941 1255 aaPredicted RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CD36P16671 472 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF16P17020 682 aaPredicted RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 SRMP19623 302 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 RAB3AP20336 220 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CPT2P23786 658 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 PSMB9P28065 219 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 BDKRB2P30411 391 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 PTGFRP43088 359 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 OR3A1P47881 315 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 MTNR1BP49286 362 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 ATP1B3P54709 279 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 DLX6P56179 175 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 MTCP1P56278 107 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 OR10A3P58181 314 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 FGF12P61328 243 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 PAX5Q02548 391 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 MZT1Q08AG7 82 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 TRAM1Q15629 374 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 HSD17B12Q53GQ0 312 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 DDI2Q5TDH0 399 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 WDR25Q64LD2 544 aaPredicted RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 SFRP4Q6FHJ7 346 aaPredicted RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 C22orf42Q6IC83 251 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF573Q86YE8 665 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 BATF2Q8N1L9 274 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 GAPTQ8N292 157 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 NKAIN3Q8N8D7 197 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 TMEM104Q8NE00 496 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 DEFB108BQ8NET1 73 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 OR5T2Q8NGG2 359 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 OR5D18Q8NGL1 313 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 OR5D14Q8NGL3 314 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 OR11L1Q8NGX0 322 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 ZNF671Q8TAW3 534 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 TBC1D15Q8TC07 691 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 THRSPQ92748 146 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 RAB1CQ92928 201 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 BORCS8Q96FH0 119 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 NEIL1Q96FI4 390 aaPredicted RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 COQ2Q96H96 371 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 CEP19Q96LK0 163 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 UQCC2Q9BRT2 126 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 FUNDC2Q9BWH2 189 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 TM2D1Q9BX74 207 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 MRPS26Q9BYN8 205 aaKnown RBP3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 BARHL1Q9BZE3 327 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 IFT22Q9H7X7 185 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 RHOFQ9HBH0 211 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 MMP26Q9NRE1 261 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 SNTG1Q9NSN8 517 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 RASL12Q9NYN1 266 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 NLKQ9UBE8 527 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 C2CD3Q4AC94 2353 aa3.12□□□□□ -1.91
SMARCE1-215ENST00000578995 TET2Q6N021 2002 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 A0A0B4J203 849 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TRAV38-1A0A0B4J264 116 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 IGHV2-70DA0A0C4DH43 119 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 hCG_1807616A0A1W2PRN6 198 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 RFPL4AA6NLU0 287 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 LRRC30A6NM36 301 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 IFITM5A6NNB3 132 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 RFPL4AL1F8VTS6 287 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 K7N7A8 449 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SLC33A1O00400 549 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 DVL1O14640 695 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 PHF1O43189 567 aaPredicted RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 TPD52L2O43399 206 aaKnown RBP3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 ARL6IP5O75915 188 aa3.11□□□□□ -1.91
SMARCE1-215ENST00000578995 SERPINA3P01011 423 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms