RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 S100A12P80511 92 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 TMEM128Q5BJH2 165 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 MRPL24Q96A35 216 aaKnown RBP7.43□□□□□ -1.22
RPAIN-215ENST00000575112 ZNF285Q96NJ3 590 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 SRXN1Q9BYN0 137 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 SLC26A1Q9H2B4 701 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 RNF122Q9H9V4 155 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 MYOZ1Q9NP98 299 aaPredicted RBP7.43□□□□□ -1.22
RPAIN-215ENST00000575112 PUS1Q9Y606 427 aaKnown RBP eCLIP7.43□□□□□ -1.22
RPAIN-215ENST00000575112 FTCDNL1E5RQL4 147 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 MSTNO14793 375 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 NRASP01111 189 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 RAB5AP20339 215 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 PIGPP57054 158 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 PMP22Q01453 160 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 PRSS54Q6PEW0 395 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 SPNS3Q6ZMD2 512 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 DOK3Q7L591 496 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 CCDC54Q8NEL0 328 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 SAP25Q8TEE9 199 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 METTL9Q9H1A3 318 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 OR51M1Q9H341 326 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 PRO1933Q9H354 126 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 FAM206AQ9NX38 181 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 B3GAT1Q9P2W7 334 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 TIMM10BQ9Y5J6 103 aa7.43□□□□□ -1.22
RPAIN-215ENST00000575112 TLN1Q9Y490 2541 aaKnown RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 H7C1Q1 480 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 CST7O76096 145 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 S100GP29377 79 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 IDH3GP51553 393 aaPredicted RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 HOXA4Q00056 320 aaPredicted RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 PLP2Q04941 152 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 SHBQ15464 509 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 HAGHQ16775 308 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 WDR74Q6RFH5 385 aaPredicted RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 NKAIN3Q8N8D7 197 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 THRSPQ92748 146 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 C1orf147Q96MC9 270 aaPredicted RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 NMES1Q9C002 83 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 ADAMTS9Q9P2N4 1935 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 K7EPK0 472 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 SELLP14151 372 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 ZNF17P17021 662 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 MAGEA5P43359 124 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 SULT1A1P50225 295 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 ARF1P84077 181 aaKnown RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 NHLH2Q02577 135 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 ROM1Q03395 351 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 C1orf100Q5SVJ3 147 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 TUSC5Q8IXB3 177 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 FAM71E2Q8N5Q1 922 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 HINT2Q9BX68 163 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 CHD8Q9HCK8 2581 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 CHD3Q12873 2000 aaKnown RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 CDRT15L2A8MXV6 281 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 SFT2D2O95562 160 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 PGA4P0DJD7 388 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 PGA3P0DJD8 388 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 HOXC12P31275 282 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 THBS4P35443 961 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 DUSP3P51452 185 aaPredicted RBP7.42□□□□□ -1.22
RPAIN-215ENST00000575112 MMP16P51512 607 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 SCAND1P57086 179 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 CLEC12BQ2HXU8 276 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 FDX2Q6P4F2 183 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 IL34Q6ZMJ4 242 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 ZDHHC22Q8N966 263 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 POC1AQ8NBT0 407 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 FGFBP3Q8TAT2 258 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 FAM131CQ96AQ9 280 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 PFDN5Q99471 154 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 FOXB1Q99853 325 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 EGLN1Q9GZT9 426 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 SLC17A5Q9NRA2 495 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 DNAJB11Q9UBS4 358 aa7.42□□□□□ -1.22
RPAIN-215ENST00000575112 DHRS7CA6NNS2 312 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 NPIPB7O75200 414 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 ZNF728P0DKX0 622 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 RPL12P30050 165 aaKnown RBP7.41□□□□□ -1.22
RPAIN-215ENST00000575112 CAMLGP49069 296 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 MALLQ13021 153 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 TMEM268Q5VZI3 342 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 OR2T2Q6IF00 324 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 ZNF383Q8NA42 475 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 OR56B2PQ8NGI1 322 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 IL36RNQ9UBH0 155 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 IL17BQ9UHF5 180 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 LOC390937A0A1W2PQ73 354 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 A0A1W2PQD3 144 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 UMAD1C9J7I0 102 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 HMGB3O15347 200 aaKnown RBP7.41□□□□□ -1.22
RPAIN-215ENST00000575112 SNAPC5O75971 98 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 CXCL1P09341 107 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 CFPP27918 469 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 RPS10P46783 165 aaKnown RBP7.41□□□□□ -1.22
RPAIN-215ENST00000575112 NPBWR2P48146 333 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 RBP2P50120 134 aa7.41□□□□□ -1.22
RPAIN-215ENST00000575112 SUCLG1P53597 346 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms