RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PRSS44E7EML9 344 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 CNOT4O95628 575 aaKnown RBP12.02□□□□□ -0.49
VPS33B-208ENST00000574755 HOXB5P09067 269 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 DUSP1P28562 367 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 GLP1RP43220 463 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 PIGPP57054 158 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 PPP1CBP62140 327 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 NEK7Q8TDX7 302 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 ZNF488Q96MN9 340 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 DHRS9Q9BPW9 319 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 C1orf123Q9NWV4 160 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 KIF25Q9UIL4 384 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
VPS33B-208ENST00000574755 CRYM-AS1A6NIL9 109 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 TPD52L2O43399 206 aaKnown RBP12.01□□□□□ -0.49
VPS33B-208ENST00000574755 ACSF3Q4G176 576 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-208ENST00000574755 ABCA11PQ4W5N1 156 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 OR2A2Q6IF42 318 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 ZNF585AQ6P3V2 769 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 INO80CQ6PI98 192 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-208ENST00000574755 FBXW12Q6X9E4 464 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 DCUN1D4Q92564 292 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 OR10C1Q96KK4 312 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 PRRX2Q99811 253 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 PLK3Q9H4B4 646 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 AKAP13Q12802 2813 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 MUC6Q6W4X9 2439 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 POM121CA8CG34 1229 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 ERVS71-1P61550 626 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 FOXF2Q12947 444 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 OR5T2Q8NGG2 359 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
VPS33B-208ENST00000574755 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
VPS33B-208ENST00000574755 AHRRA9YTQ3 701 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 KCNAB3O43448 404 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 BCL2L11O43521 198 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 RLN2P04090 185 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 RRASP10301 218 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
VPS33B-208ENST00000574755 IL24Q13007 206 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 ST8SIA2Q92186 375 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 C2orf50Q96LR7 162 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 SVILO95425 2214 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 KLK10O43240 276 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 COX5AP20674 150 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 UCP2P55851 309 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 IGFBP7Q16270 282 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 IGSF11Q5DX21 431 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 OR1J1Q8NGS3 322 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 SLC25A40Q8TBP6 338 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 RTN4IP1Q8WWV3 396 aaPredicted RBP12□□□□□ -0.49
VPS33B-208ENST00000574755 RTL8AQ9BWD3 113 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 ZNF471Q9BX82 626 aaPredicted RBP12□□□□□ -0.49
VPS33B-208ENST00000574755 PKIBQ9C010 78 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 OR51I2Q9H344 312 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 GSKIPQ9P0R6 139 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 KCNIP3Q9Y2W7 256 aa12□□□□□ -0.49
VPS33B-208ENST00000574755 DSPP15924 2871 aaKnown RBP12□□□□□ -0.49
VPS33B-208ENST00000574755 RHBDL1O75783 438 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 AGFG2O95081 481 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 NMBP08949 121 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 LUMP51884 338 aaPredicted RBP11.99□□□□□ -0.49
VPS33B-208ENST00000574755 HERV-K104P61576 105 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 IGFL3Q6UXB1 125 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 LINC00596Q86U02 117 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 C17orf78Q8N4C9 275 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 MOB3AQ96BX8 217 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 SPACA1Q9HBV2 294 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 SLC2A9Q9NRM0 540 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 GVINP1Q7Z2Y8 2422 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 J3QT63 122 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 NAPSAO96009 420 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
VPS33B-208ENST00000574755 TOR2AQ5JU69 321 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 FAM58AQ8N1B3 248 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 PIK3IP1Q96FE7 263 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 RNF126Q9BV68 326 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 Q9N2K0 584 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 DKK4Q9UBT3 224 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 MEMO1Q9Y316 297 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 CEP250Q9BV73 2442 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 INTS1Q8N201 2190 aaKnown RBP11.99□□□□□ -0.49
VPS33B-208ENST00000574755 GTF3C1Q12789 2109 aa11.99□□□□□ -0.49
VPS33B-208ENST00000574755 TRBV6-7A0A0A0MS04 114 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 H0YIZ8 118 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 I3L521 148 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 HS3ST1O14792 307 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 PPYP01298 95 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 IGKV3-15P01624 115 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 PET100P0DJ07 73 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 RAC2P15153 192 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 CBR1P16152 277 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 AADACP22760 399 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 RAB32Q13637 225 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 RBM39Q14498 530 aaKnown RBP11.98□□□□□ -0.49
VPS33B-208ENST00000574755 SP6Q3SY56 376 aa11.98□□□□□ -0.49
VPS33B-208ENST00000574755 Q6ZS49 121 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms