RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SUCNR1Q9BXA5 334 aa7.09□□□□□ -1.27
SMG6-210ENST00000572205 CDCA4Q9BXL8 241 aa7.09□□□□□ -1.27
SMG6-210ENST00000572205 FAM234AQ9H0X4 552 aa7.09□□□□□ -1.27
SMG6-210ENST00000572205 CNTD2Q9H8S5 307 aa7.09□□□□□ -1.27
SMG6-210ENST00000572205 HMG20AQ9NP66 347 aa7.09□□□□□ -1.27
SMG6-210ENST00000572205 SIRT7Q9NRC8 400 aa7.09□□□□□ -1.27
SMG6-210ENST00000572205 BABAM2Q9NXR7 383 aa7.09□□□□□ -1.27
SMG6-210ENST00000572205 IRGMA1A4Y4 181 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 TMEM89A2RUT3 159 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 EFCAB10A6NFE3 127 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 ODF3BA8MYP8 253 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 ATP6V1G2O95670 118 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 CD1AP06126 327 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 MELTFP08582 738 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 CALCBP10092 127 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 ZNF20P17024 532 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 RAB6AP20340 208 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 PRKACBP22694 351 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 PRTN3P24158 256 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 LMO1P25800 156 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 GABRA2P47869 451 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 SOX2P48431 317 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 POU3F4P49335 361 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 GBX2P52951 348 aaPredicted RBP7.08□□□□□ -1.28
SMG6-210ENST00000572205 WNT4P56705 351 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 KISS1Q15726 138 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 UTF1Q5T230 341 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 TMEM200BQ69YZ2 307 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 ELP2Q6IA86 826 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 IZUMO2Q6UXV1 221 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 Q6YL49 198 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 C1orf122Q6ZSJ8 110 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 SAXO1Q8IYX7 474 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 OR8H2Q8N162 312 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 BPIFB2Q8N4F0 458 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 TMEM185AQ8NFB2 350 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 OR4S1Q8NGB4 309 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 ZNF418Q8TF45 676 aaPredicted RBP7.08□□□□□ -1.28
SMG6-210ENST00000572205 GHSRQ92847 366 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 LHX4Q969G2 390 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 DUX5Q96PT3 197 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 DERL3Q96Q80 235 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 PPIL3Q9H2H8 161 aaKnown RBP7.08□□□□□ -1.28
SMG6-210ENST00000572205 PRR13Q9NZ81 148 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 ZNRD1Q9P1U0 126 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 SLC7A11Q9UPY5 501 aa7.08□□□□□ -1.28
SMG6-210ENST00000572205 MEX3AA1L020 520 aaKnown RBP7.07□□□□□ -1.28
SMG6-210ENST00000572205 C17orf98A8MV24 154 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 OR2H2O95918 312 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 HAND1O96004 215 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 CD37P11049 281 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 NDUFB7P17568 137 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 CRHBPP24387 322 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 DUSP1P28562 367 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 GDNFP39905 211 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 OR3A4PP47883 348 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 MECP2P51608 486 aaKnown RBP7.07□□□□□ -1.28
SMG6-210ENST00000572205 ATP1B3P54709 279 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 MTCP1P56278 107 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 BDH1Q02338 343 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 PAX5Q02548 391 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 PDCD1Q15116 288 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 TAF9Q16594 264 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 Q499Y3 187 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 YIF1BQ5BJH7 314 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 SPIN3Q5JUX0 258 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 FAM27D1Q5T7N8 215 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 METTL11BQ5VVY1 283 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 MKXQ8IYA7 352 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 Q8IYB0 196 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 FAM58AQ8N1B3 248 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 DYNAPQ8N1N2 210 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 TPRX1Q8N7U7 411 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 ZSCAN4Q8NAM6 433 aaPredicted RBP7.07□□□□□ -1.28
SMG6-210ENST00000572205 PXT1Q8NFP0 134 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 BPIFB6Q8NFQ5 453 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 OR51T1Q8NGJ9 327 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 GPR148Q8TDV2 347 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 H1FXQ92522 213 aaKnown RBP7.07□□□□□ -1.28
SMG6-210ENST00000572205 EMG1Q92979 244 aaKnown RBP7.07□□□□□ -1.28
SMG6-210ENST00000572205 OR14A2Q96R54 314 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 IL36GQ9NZH8 169 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 ONECUT1Q9UBC0 465 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 OR14J1Q9UGF5 321 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 DHDHQ9UQ10 334 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 ZNF281Q9Y2X9 895 aa7.07□□□□□ -1.28
SMG6-210ENST00000572205 SF3B6Q9Y3B4 125 aaKnown RBP7.07□□□□□ -1.28
SMG6-210ENST00000572205 PRKDCP78527 4128 aaKnown RBP7.06□□□□□ -1.28
SMG6-210ENST00000572205 TRAV24A0A0B4J272 114 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 A0A1W2PP11 408 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 SLC33A1O00400 549 aaPredicted RBP7.06□□□□□ -1.28
SMG6-210ENST00000572205 HOXA3O43365 443 aaPredicted RBP7.06□□□□□ -1.28
SMG6-210ENST00000572205 MMP23AO75900 390 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 INMTO95050 263 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 ALDOBP05062 364 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 CSN2P05814 226 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 OCM2P0CE71 109 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 CGB3P0DN86 165 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 CGB7P0DN87 165 aa7.06□□□□□ -1.28
SMG6-210ENST00000572205 VSIG8P0DPA2 414 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms