RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 FAM106CPP0CH98 169 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 PRKACAP17612 351 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 BCL3P20749 454 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 ERP29P30040 261 aaKnown RBP15.65■□□□□ 0.1
CCDC40-206ENST00000572083 ECI1P42126 302 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 CCDC144NLQ6NUI1 221 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 ENTHD1Q8IYW4 607 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 C5orf56Q8N8D9 126 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 CREB3L1Q96BA8 519 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 BORCS8Q96FH0 119 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 CNN2Q99439 309 aaKnown RBP15.65■□□□□ 0.1
CCDC40-206ENST00000572083 SNX5Q9Y5X3 404 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 CSMD3Q7Z407 3707 aa15.65■□□□□ 0.1
CCDC40-206ENST00000572083 ENTPD6O75354 484 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 CCL1P22362 96 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 CD34P28906 385 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 GLIPR1P48060 266 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 FUT6P51993 359 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 GP2P55259 537 aaKnown RBP15.64■□□□□ 0.09
CCDC40-206ENST00000572083 GK3PQ14409 553 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 KPNB1Q14974 876 aaKnown RBP15.64■□□□□ 0.09
CCDC40-206ENST00000572083 DHFR2Q86XF0 187 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 Q8IYB0 196 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 HS3ST5Q8IZT8 346 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 FAM58AQ8N1B3 248 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 OR56B4Q8NH76 319 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 SEBOXQ9HB31 216 aaPredicted RBP15.64■□□□□ 0.09
CCDC40-206ENST00000572083 NDE1Q9NXR1 346 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 TVP23BQ9NYZ1 205 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 GLS2Q9UI32 602 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 KIAA2026Q5HYC2 2103 aa15.64■□□□□ 0.09
CCDC40-206ENST00000572083 STARD9Q9P2P6 4700 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 TRBV2A0A0J9YWF9 115 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 GATBO75879 557 aaKnown RBP15.63■□□□□ 0.09
CCDC40-206ENST00000572083 RPP14O95059 124 aaKnown RBP15.63■□□□□ 0.09
CCDC40-206ENST00000572083 POU3F4P49335 361 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 SLC35B1P78383 322 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 AESQ08117 197 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 HES1Q14469 280 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 ZNF146Q15072 292 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 C9orf66Q5T8R8 295 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 SLC35F2Q8IXU6 374 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 Q8NFD4 153 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 OR5M8Q8NGP6 311 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 TOMM40LQ969M1 308 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 CHST5Q9GZS9 411 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 ZNF556Q9HAH1 456 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 SLC25A19Q9HC21 320 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 ING3Q9NXR8 418 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 TAS2R3Q9NYW6 316 aa15.63■□□□□ 0.09
CCDC40-206ENST00000572083 MRM2Q9UI43 246 aaKnown RBP15.63■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A18PA6NE21 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A16PA6NEW6 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A20PA6NIJ5 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A9PA6NNJ1 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A12PA8MX19 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A5PA8MXJ8 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 OOSP1A8MZH6 123 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 SYT7O43581 403 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A15PP0C7V4 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A13PP0C7W8 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A14PP0C7W9 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 FAM90A24PP0C7X0 464 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 RAP2AP10114 183 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 TMEM11P17152 192 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 PTGFRP43088 359 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 PRRX1P54821 245 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 HNF4GQ14541 408 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 SPIN3Q5JUX0 258 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 LCNL1Q6ZST4 164 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 BCDIN3DQ7Z5W3 292 aaKnown RBP15.62■□□□□ 0.09
CCDC40-206ENST00000572083 SLC35E3Q7Z769 313 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 STPG2Q8N412 459 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 OR4D6Q8NGJ1 314 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 RPEQ96AT9 228 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 TEX12Q9BXU0 123 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 GSTK1Q9Y2Q3 226 aa15.62■□□□□ 0.09
CCDC40-206ENST00000572083 SEC14L6B5MCN3 397 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 GNGT2O14610 69 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 OR2H2O95918 312 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 RPLP1P05386 114 aaKnown RBP15.61■□□□□ 0.09
CCDC40-206ENST00000572083 NFYBP25208 207 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 CHATP28329 748 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 ACTR3P61158 418 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 MS4A2Q01362 244 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 COMMD1Q8N668 190 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 DRAM1Q8N682 238 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 OR8U1Q8NH10 309 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 CORO2AQ92828 525 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 DCLRE1BQ9H816 532 aa15.61■□□□□ 0.09
CCDC40-206ENST00000572083 EXOSC4Q9NPD3 245 aaKnown RBP15.61■□□□□ 0.09
CCDC40-206ENST00000572083 ODAMA1E959 279 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 M0R129 80 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 SNX3O60493 162 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 CYB5AP00167 134 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 IGHV3-7P01780 117 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 IGHG2P01859 326 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 PRKACGP22612 351 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 CDC42P60953 191 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 THNSL2Q86YJ6 484 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms