RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 C2orf68Q2NKX9 166 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 PLA1AQ53H76 456 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZNF626Q68DY1 528 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 ASPHD2Q6ICH7 369 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 C11orf88Q6PI97 169 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZBTB49Q6ZSB9 765 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 TCF23Q7RTU1 214 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 LHFPL4Q7Z7J7 247 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 TRAPPC6BQ86SZ2 158 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 LHFPL3Q86UP9 236 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 PQLC1Q8N2U9 271 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 TPRX1Q8N7U7 411 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR10AC1Q8NH08 325 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR2T6Q8NHC8 308 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 COMMD4Q9H0A8 199 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 RANBP3Q9H6Z4 567 aaPredicted RBP10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 S100A14Q9HCY8 104 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 EXOSC4Q9NPD3 245 aaKnown RBP10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 ABCB10Q9NRK6 738 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 FBLN5Q9UBX5 448 aa10.02□□□□□ -0.81
CTDNEP1-205ENST00000570828 LOC100130705A0A1B0GUX0 176 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 FAM90A8PA6NJQ4 464 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 TMEM212A6NML5 194 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 VGLL3A8MV65 326 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 ODF3BA8MYP8 253 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 SIRPB1O00241 398 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 EBAG9O00559 213 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 MGST3O14880 152 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 KCNAB3O43448 404 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 PSPNO60542 156 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 MT-ND2P03891 347 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 HCKP08631 526 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 CALCBP10092 127 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 P2RX3P56373 397 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 RAB40BQ12829 278 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 MRPL28Q13084 256 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 FAM189A2Q15884 450 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 Q6ZTK2 550 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 DTX3Q8N9I9 347 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR11H6Q8NGC7 330 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR52N4Q8NGI2 321 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR5D18Q8NGL1 313 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 RHOXF1Q8NHV9 184 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 RPS4Y2Q8TD47 263 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 TSEN15Q8WW01 171 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 SPACA5Q96QH8 159 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZCCHC4Q9H5U6 513 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 ISG20L2Q9H9L3 353 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 HMG20AQ9NP66 347 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 AMBNQ9NP70 447 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 ERVK13-1Q9NX77 482 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 MYRFQ9Y2G1 1151 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 GSTK1Q9Y2Q3 226 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 RPL36Q9Y3U8 105 aaKnown RBP10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 SESN1Q9Y6P5 492 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 NOTCH1P46531 2555 aa10.01□□□□□ -0.81
CTDNEP1-205ENST00000570828 IGKV1-12A0A0C4DH73 117 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 FUOMA2VDF0 154 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 SH2D1BO14796 132 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 CHST1O43916 411 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 KDM4BO94953 1096 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZFPL1O95159 310 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR2H2O95918 312 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 IGKV1D-12P01611 117 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 CCDC159P0C7I6 412 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 ERP29P30040 261 aaKnown RBP10□□□□□ -0.81
CTDNEP1-205ENST00000570828 KIR2DS4P43632 304 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR3A1P47881 315 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 EFNB2P52799 333 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 GBX2P52951 348 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-205ENST00000570828 DEFA6Q01524 100 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 SSX2Q16385 188 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 CRIP3Q6Q6R5 217 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR4S1Q8NGB4 309 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR5D14Q8NGL3 314 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR5AK2Q8NH90 309 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 HAVCR2Q8TDQ0 301 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 MALSU1Q96EH3 234 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 CPNE2Q96FN4 548 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-205ENST00000570828 NKX3-1Q99801 234 aaPredicted RBP10□□□□□ -0.81
CTDNEP1-205ENST00000570828 SLC29A1Q99808 456 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 CDCA4Q9BXL8 241 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 GAL3ST2Q9H3Q3 398 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 RHOFQ9HBH0 211 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 FAM118AQ9NWS6 357 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 PITPNC1Q9UKF7 332 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 DHDHQ9UQ10 334 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 TCF19Q9Y242 345 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 SIGLEC9Q9Y336 463 aa10□□□□□ -0.81
CTDNEP1-205ENST00000570828 WNK1Q9H4A3 2382 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 TRGV10A0A0A0MS01 117 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 IGHV2-26A0A0B4J1V2 119 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 F2RL2O00254 374 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 SULT1B1O43704 296 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 BAG2O95816 211 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 TSPAN15O95858 294 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZNF44P15621 663 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 HERPUD1Q15011 391 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZSCAN26Q16670 478 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 MINOS1Q5TGZ0 78 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms