RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 IGHV1-8P0DP01 117 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 JUNBP17275 347 aaPredicted RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 GDNFP39905 211 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 GLIPR1P48060 266 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 P2RX3P56373 397 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 MEF2CQ06413 473 aaPredicted RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 SCN1BQ07699 218 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 MRPL28Q13084 256 aaKnown RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 DOC2BQ14184 412 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 CDK5R1Q15078 307 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 KISS1Q15726 138 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 LRRC75BQ2VPJ9 315 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 PLA1AQ53H76 456 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 SPIN3Q5JUX0 258 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 OGFRL1Q5TC84 451 aaPredicted RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 ZNF626Q68DY1 528 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 SLC35E4Q6ICL7 350 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 ZNF529Q6P280 563 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 RPL22L1Q6P5R6 122 aaKnown RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 SERPINA12Q8IW75 414 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 SAXO1Q8IYX7 474 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 DHRSXQ8N5I4 330 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 PACRGLQ8N7B6 248 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 ZFP41Q8N8Y5 198 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 ZNF485Q8NCK3 441 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 OR5D14Q8NGL3 314 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 OR13C5Q8NGS8 318 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 OR5R1Q8NH85 324 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 TSEN15Q8WW01 171 aaKnown RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 ORAI1Q96D31 301 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 ZNF714Q96N38 554 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 COMMD4Q9H0A8 199 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 PPA2Q9H2U2 334 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 C16orf95Q9H693 158 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 NEK6Q9HC98 313 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 EXOSC4Q9NPD3 245 aaKnown RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 ZNF581Q9P0T4 197 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 DIMT1Q9UNQ2 313 aaKnown RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 SIGLEC9Q9Y336 463 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 EXOSC1Q9Y3B2 195 aaKnown RBP4.38□□□□□ -1.71
CHD3-212ENST00000570758 LINC00312Q9Y6C7 94 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 TENM1Q9UKZ4 2725 aa4.38□□□□□ -1.71
CHD3-212ENST00000570758 IGHV2-26A0A0B4J1V2 119 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 A0A0G2JK05 382 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 hCG_1809904A0A1W2PP81 198 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 A0A1W2PPE2 198 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 A0A1W2PR64 198 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 A0A1W2PRV1 198 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 SLC33A1O00400 549 aaPredicted RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 GABRPO00591 440 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 SH2D1BO14796 132 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 CASQ2O14958 399 aaPredicted RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 XPNPEP2O43895 674 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 RBP4P02753 201 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 GNAO1P09471 354 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 TMEM225BP0DP42 221 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 ZNF44P15621 663 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 RAB3AP20336 220 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 LMO1P25800 156 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 DCKP27707 260 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 ERP29P30040 261 aaKnown RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 TGFBR2P37173 567 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 CAPGP40121 348 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 OR3A4PP47883 348 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 RAB13P51153 203 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 LGALS4P56470 323 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 AESQ08117 197 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 DYNC1I2Q13409 638 aaKnown RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 ATXN7L3Q14CW9 347 aaPredicted RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 FAM189A2Q15884 450 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 AANATQ16613 207 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 UTF1Q5T230 341 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 PRAMEF5Q5TYX0 476 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 TTC23Q5W5X9 447 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 HIST2H2BDQ6DRA6 164 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 DMKNQ6E0U4 476 aaPredicted RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 BRICD5Q6PL45 260 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 CCBE1Q6UXH8 406 aaPredicted RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 TREML4Q6UXN2 200 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 TMPRSS11AQ6ZMR5 421 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 SATL1Q86VE3 508 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 SETD9Q8NE22 299 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 PXT1Q8NFP0 134 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 OR11H6Q8NGC7 330 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 OR13D1Q8NGV5 346 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 OR10K1Q8NGX5 313 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 OR52N1Q8NH53 320 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 GPR148Q8TDV2 347 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 FBLIM1Q8WUP2 373 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 TNFAIP8L1Q8WVP5 186 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 GGHQ92820 318 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 COQ2Q96H96 371 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 TMEM80Q96HE8 168 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 NR1H4Q96RI1 486 aaPredicted RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 MYCBPQ99417 103 aaPredicted RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 PPIL3Q9H2H8 161 aaKnown RBP4.37□□□□□ -1.71
CHD3-212ENST00000570758 C8orf4Q9NR00 106 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 BABAM2Q9NXR7 383 aa4.37□□□□□ -1.71
CHD3-212ENST00000570758 ING3Q9NXR8 418 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms