RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 LMO1P25800 156 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 ERP29P30040 261 aaKnown RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 ETV1P50549 477 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 GTF2A1P52655 376 aaPredicted RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 EFNB2P52799 333 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 SNU13P55769 128 aaKnown RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 DOC2BQ14184 412 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 CDK5R1Q15078 307 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 KISS1Q15726 138 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 OR2G6Q5TZ20 316 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 LAIR2Q6ISS4 152 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 Q6P435 159 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 CCBE1Q6UXH8 406 aaPredicted RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 BAIAP2L2Q6UXY1 529 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 ZNF485Q8NCK3 441 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 OR5AK2Q8NH90 309 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 MRPL48Q96GC5 212 aaKnown RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 COQ2Q96H96 371 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 PPA2Q9H2U2 334 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 RANBP3Q9H6Z4 567 aaPredicted RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 EXOSC4Q9NPD3 245 aaKnown RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 FBLN5Q9UBX5 448 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 SIGLEC9Q9Y336 463 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 TBL2Q9Y4P3 447 aaKnown RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 SIRT4Q9Y6E7 314 aaPredicted RBP6.32□□□□□ -1.4
CDH3-209ENST00000569080 SESN1Q9Y6P5 492 aa6.32□□□□□ -1.4
CDH3-209ENST00000569080 A0A0G2JK05 382 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 hCG_1809904A0A1W2PP81 198 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 A0A1W2PPE2 198 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 A0A1W2PR64 198 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 A0A1W2PRV1 198 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 hADV38S2A0JD32 116 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 A6NDX4 124 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 SIRPB1O00241 398 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 SLC33A1O00400 549 aaPredicted RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 GABRPO00591 440 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 KCNAB3O43448 404 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 BAG2O95816 211 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 TSPAN15O95858 294 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 CYB5AP00167 134 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 ARG1P05089 322 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 JUNBP17275 347 aaPredicted RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 DCKP27707 260 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 GDNFP39905 211 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 GBX2P52951 348 aaPredicted RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 ADARB1P78563 741 aaKnown RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 RCN1Q15293 331 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 LY6EQ16553 131 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 CCDC58Q4VC31 144 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 PLA1AQ53H76 456 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 FBLN7Q53RD9 439 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 UTF1Q5T230 341 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 ELP2Q6IA86 826 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 SLC35E4Q6ICL7 350 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 LIAT1Q6ZQX7 453 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 SERPINA12Q8IW75 414 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 PACRGLQ8N7B6 248 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 Q8NFD4 153 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 PXT1Q8NFP0 134 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 OR4P4Q8NGL7 312 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 HAVCR2Q8TDQ0 301 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 WIPF2Q8TF74 440 aaPredicted RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 FBLIM1Q8WUP2 373 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 CORO2AQ92828 525 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 FOXRED1Q96CU9 486 aaPredicted RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 SMIM19Q96E16 107 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 PGLYRP3Q96LB9 341 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 NKX3-1Q99801 234 aaPredicted RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 TMEM133Q9H2Q1 129 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 RHOFQ9HBH0 211 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 TAS2R4Q9NYW5 299 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 CLEC2DQ9UHP7 191 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 DIMT1Q9UNQ2 313 aaKnown RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 DHDHQ9UQ10 334 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 TCF19Q9Y242 345 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 GSTK1Q9Y2Q3 226 aa6.31□□□□□ -1.4
CDH3-209ENST00000569080 UBE2J1Q9Y385 318 aaPredicted RBP6.31□□□□□ -1.4
CDH3-209ENST00000569080 TRAV24A0A0B4J272 114 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 TRBV5-5A0A0J9YX44 114 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 ODAMA1E959 279 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 MAGEA13PA6NCF6 341 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 FAM90A22PA8MWA6 464 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 CASQ2O14958 399 aaPredicted RBP6.3□□□□□ -1.4
CDH3-209ENST00000569080 OGG1O15527 345 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 IGLV1-47P01700 117 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 HCKP08631 526 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 RPSAP08865 295 aaKnown RBP6.3□□□□□ -1.4
CDH3-209ENST00000569080 GNAO1P09471 354 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 CD34P28906 385 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 GABRA5P31644 462 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 KIR2DS4P43632 304 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 GLIPR1P48060 266 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 SOX2P48431 317 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 DYNLT3P51808 116 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 RPS11P62280 158 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDH3-209ENST00000569080 PAX5Q02548 391 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 SSX2Q16385 188 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 LRRC36Q1X8D7 754 aa6.3□□□□□ -1.4
CDH3-209ENST00000569080 C17orf58Q2M2W7 97 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms