RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 DUX4L2P0CJ85 424 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DUX4L3P0CJ86 424 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DUX4L4P0CJ87 422 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DUX4L5P0CJ88 424 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DUX4L6P0CJ89 424 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DUX4L7P0CJ90 424 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 SELLP14151 372 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 RAB3BP20337 219 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 GABRR1P24046 479 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 RBM11P57052 281 aaKnown RBP10.09□□□□□ -0.79
SF3B3-208ENST00000567250 SCGB2A2Q13296 93 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 MPV17LQ2QL34 196 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 CR1LQ2VPA4 569 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DUX4L9Q6RFH8 374 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-208ENST00000567250 C1QL2Q7Z5L3 287 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 TPRA1Q86W33 373 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 LYPD6Q86Y78 171 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 CMTM4Q8IZR5 234 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 OR8H2Q8N162 312 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 OR4D6Q8NGJ1 314 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 OR10K1Q8NGX5 313 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 C8orf46Q8TAG6 207 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 SNX22Q96L94 193 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 KCTD7Q96MP8 289 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 NKX3-1Q99801 234 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-208ENST00000567250 CHCHD6Q9BRQ6 235 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DCTN5Q9BTE1 182 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 PPIL3Q9H2H8 161 aaKnown RBP10.09□□□□□ -0.79
SF3B3-208ENST00000567250 C7orf69Q9H7B7 122 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 IL36RNQ9UBH0 155 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 DUX4Q9UBX2 424 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 ST3GAL6Q9Y274 331 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 AK6Q9Y3D8 172 aaKnown RBP10.09□□□□□ -0.79
SF3B3-208ENST00000567250 V9GY05 133 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 LOC100506127A0A0U1RQW1 187 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 KIR2DS1A0A191URI9 304 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A10PA6NDY2 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A18PA6NE21 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A16PA6NEW6 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A20PA6NIJ5 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A8PA6NJQ4 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A7PA6NKC0 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A22PA8MWA6 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A12PA8MX19 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A5PA8MXJ8 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A23PA8MXZ1 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 C22orf46C9J442 243 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 SIRPB1O00241 398 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 ZNF737O75373 536 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 BPNT1O95861 308 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 TFF1P04155 84 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A15PP0C7V4 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A13PP0C7W8 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A14PP0C7W9 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM90A24PP0C7X0 464 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 SMIM18P0DKX4 95 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 PPIAL4GP0DN37 164 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 CALCBP10092 127 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 MGMTP16455 207 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 KCNJ3P48549 501 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 PAX2Q02962 417 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 GRK1Q15835 563 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 RAB11BQ15907 218 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 TUSC1Q2TAM9 212 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 CHRFAM7AQ494W8 412 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 FAM120AOSQ5T036 256 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 METTL11BQ5VVY1 283 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 KIR3DL3Q8N743 410 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 BEX2Q9BXY8 128 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 OR51E2Q9H255 320 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 IFT22Q9H7X7 185 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 SPACA1Q9HBV2 294 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 MMP26Q9NRE1 261 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 AUP1Q9Y679 476 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 MTORP42345 2549 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 DSCAML1Q8TD84 2053 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 WNK2Q9Y3S1 2297 aa10.08□□□□□ -0.8
SF3B3-208ENST00000567250 MGST3O14880 152 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 DEGS1O15121 323 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 AIREO43918 545 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 CRTAPO75718 401 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-208ENST00000567250 OR7C1O76099 320 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-208ENST00000567250 CSN2P05814 226 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 ARSBP15848 533 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 GADD45AP24522 165 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 LMO1P25800 156 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 CFPP27918 469 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 DUSP1P28562 367 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 SRP14P37108 136 aaKnown RBP10.07□□□□□ -0.8
SF3B3-208ENST00000567250 EDDM3BP56851 147 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 BLMHQ13867 455 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 PIGYQ3MUY2 71 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 OR2W3Q7Z3T1 314 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 FAM185AQ8N0U4 392 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 OR13F1Q8NGS4 319 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 KCNG3Q8TAE7 436 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 DACT3Q96B18 629 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-208ENST00000567250 POM121Q96HA1 1249 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 TMEM59Q9BXS4 323 aa10.07□□□□□ -0.8
SF3B3-208ENST00000567250 TMPRSS13Q9BYE2 586 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms