RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 A6NDX4 124 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 KDM4BO94953 1096 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 FADS2O95864 444 aaKnown RBP16.28■□□□□ 0.2
CLN6-207ENST00000566347 DBTP11182 482 aaKnown RBP16.28■□□□□ 0.2
CLN6-207ENST00000566347 GABRB1P18505 474 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 RAB13P51153 203 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 SNU13P55769 128 aaKnown RBP16.28■□□□□ 0.2
CLN6-207ENST00000566347 MRPL28Q13084 256 aaKnown RBP16.28■□□□□ 0.2
CLN6-207ENST00000566347 LDLRAD2Q5SZI1 272 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 TRAPPC6BQ86SZ2 158 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 SAXO1Q8IYX7 474 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 OR13C9Q8NGT0 318 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 OR10AC1Q8NH08 325 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 RFT1Q96AA3 541 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 CLEC7AQ9BXN2 247 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 TMEM133Q9H2Q1 129 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 ZCCHC4Q9H5U6 513 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 INPP5EQ9NRR6 644 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 GSTK1Q9Y2Q3 226 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 MEGF11A6BM72 1044 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 SIRPB1O00241 398 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 OR2H2O95918 312 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 VSIG10L2P0DP72 767 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 CALCBP10092 127 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 LHFPL3Q86UP9 236 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 Q8N2B8 174 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 NDNFQ8TB73 568 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 COMMD4Q9H0A8 199 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 GAL3ST2Q9H3Q3 398 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 ZNF702PQ9H963 129 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 AASSQ9UDR5 926 aa16.27■□□□□ 0.2
CLN6-207ENST00000566347 TRGV10A0A0A0MS01 117 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 IGKV1-12A0A0C4DH73 117 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 TMEM212A6NML5 194 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 H3BUI4 141 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 F2RL2O00254 374 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 ALX3O95076 343 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 IGKV1D-12P01611 117 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 LMO1P25800 156 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 RAB40BQ12829 278 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 OR52W1Q6IF63 320 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 CCBE1Q6UXH8 406 aaPredicted RBP16.26■□□□□ 0.19
CLN6-207ENST00000566347 TMEM219Q86XT9 240 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 OR5D18Q8NGL1 313 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 OR5D14Q8NGL3 314 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 RHOXF1Q8NHV9 184 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 HAVCR2Q8TDQ0 301 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 SPACA5Q96QH8 159 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 PRSS22Q9GZN4 317 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 HILPDAQ9Y5L2 63 aa16.26■□□□□ 0.19
CLN6-207ENST00000566347 CCDC159P0C7I6 412 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 HTR1DP28221 377 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 SLC34A1Q06495 639 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 IL18R1Q13478 541 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 SERPINA12Q8IW75 414 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 C11orf44Q8N8P7 122 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 CHST4Q8NCG5 386 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 CORO2AQ92828 525 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 ISG20L2Q9H9L3 353 aaKnown RBP16.25■□□□□ 0.19
CLN6-207ENST00000566347 ERVK13-1Q9NX77 482 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 TAS2R3Q9NYW6 316 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 MYRFQ9Y2G1 1151 aa16.25■□□□□ 0.19
CLN6-207ENST00000566347 LOC100130705A0A1B0GUX0 176 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 SULT1B1O43704 296 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 ZFPL1O95159 310 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 CSN2P05814 226 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 HCKP08631 526 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 ZNF44P15621 663 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 GBX2P52951 348 aaPredicted RBP16.24■□□□□ 0.19
CLN6-207ENST00000566347 HEPN1Q6WQI6 88 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 RTN4RL2Q86UN3 420 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 PARP16Q8N5Y8 322 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 OR5AK2Q8NH90 309 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 CPNE2Q96FN4 548 aaPredicted RBP16.24■□□□□ 0.19
CLN6-207ENST00000566347 AMBNQ9NP70 447 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 SERTAD4Q9NUC0 356 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 DHDHQ9UQ10 334 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 RPL36Q9Y3U8 105 aaKnown RBP16.24■□□□□ 0.19
CLN6-207ENST00000566347 KIAA2026Q5HYC2 2103 aa16.24■□□□□ 0.19
CLN6-207ENST00000566347 FBXO24O75426 580 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 MMP23AO75900 390 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 OPN1MWP04001 364 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 OPN1MW2P0DN77 364 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 OPN1MW3P0DN78 364 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 TMEM225BP0DP42 221 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 SCN1BQ07699 218 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 HABP2Q14520 560 aaPredicted RBP16.23■□□□□ 0.19
CLN6-207ENST00000566347 KISS1Q15726 138 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 RNF144BQ7Z419 303 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 ABHD12Q8N2K0 398 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 OR4P4Q8NGL7 312 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 ZNF596Q8TC21 504 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 TSEN15Q8WW01 171 aaKnown RBP16.23■□□□□ 0.19
CLN6-207ENST00000566347 SLC29A1Q99808 456 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 ZNF649Q9BS31 505 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 S100A14Q9HCY8 104 aa16.23■□□□□ 0.19
CLN6-207ENST00000566347 MRPS18AQ9NVS2 196 aaKnown RBP16.23■□□□□ 0.19
CLN6-207ENST00000566347 A0A0G2JK05 382 aa16.22■□□□□ 0.19
CLN6-207ENST00000566347 ODAMA1E959 279 aa16.22■□□□□ 0.19
CLN6-207ENST00000566347 FAM90A22PA8MWA6 464 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms