RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ALKBH4Q9NXW9 302 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 C3orf80F5H4A9 247 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SRP19P09132 144 aaKnown RBP17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 TUBG1P23258 451 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 LSM6P62312 80 aaKnown RBP17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 YPEL4Q96NS1 127 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ARV1Q9H2C2 271 aa17.82■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ASPMQ8IZT6 3477 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 TRBV11-1A0A0K0K1C0 115 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 A0A1W2PR80 420 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 GALNSP34059 522 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 DYNLT3P51808 116 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF154Q13106 437 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 NIPSNAP3BQ9BS92 247 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 MTIF3Q9H2K0 278 aaKnown RBP17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 NECAP2Q9NVZ3 263 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 FOXI3A8MTJ6 420 aaPredicted RBP17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 BLKP51451 505 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 FBXL14Q8N1E6 418 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 COMMD1Q8N668 190 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 STRAPQ9Y3F4 350 aaKnown RBP17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 COL6A3P12111 3177 aa17.81■□□□□ 0.44
MAP1LC3B-206ENST00000564844 AADACP22760 399 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 AKR1C8PQ5T2L2 129 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SLC25A24Q6NUK1 477 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 LCN15Q6UWW0 184 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 OR14L1PQ8NHC6 308 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 POC1BQ8TC44 478 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 GALNT14Q96FL9 552 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 UNKLQ9H9P5 680 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 GLRX2Q9NS18 164 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 UBE2J1Q9Y385 318 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 BTBD17A6NE02 478 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF705GA8MUZ8 300 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 FOSL2P15408 326 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 HIST1H1BP16401 226 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 WDR25Q64LD2 544 aaPredicted RBP17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 HIST3H2BBQ8N257 126 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 MSI2Q96DH6 328 aaKnown RBP17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 MISP3Q96FF7 219 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 BOD1Q96IK1 185 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 CACNA1EQ15878 2313 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 DDTP30046 118 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 UCP2P55851 309 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 KIAA0895LQ68EN5 471 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 LGI3Q8N145 548 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ST8SIA1Q92185 356 aa17.8■□□□□ 0.44
MAP1LC3B-206ENST00000564844 CACNA1DQ01668 2161 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 IGKV1-27A0A075B6S5 117 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 OR5H1A6NKK0 313 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 NKX2-1P43699 371 aaPredicted RBP17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 RBP2P50120 134 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 VAMP2P63027 116 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 HIKESHIQ53FT3 197 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ARL6IP6Q8N6S5 226 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF385AQ96PM9 386 aaKnown RBP17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 MOB1AQ9H8S9 216 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SEC14L6B5MCN3 397 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 DHRS3O75911 302 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ICAM4Q14773 271 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SLC25A47Q6Q0C1 308 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF442Q9H7R0 627 aa17.79■□□□□ 0.44
MAP1LC3B-206ENST00000564844 A0A087WZY1 265 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ADAM20O43506 726 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 FUT3P21217 361 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 HERV-K104P61576 105 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 RSPO1Q2MKA7 263 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 GPR157Q5UAW9 335 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 LRP11Q86VZ4 500 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 OR10AD1Q8NGE0 317 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 SSC4DQ8WTU2 575 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 FAM210BQ96KR6 192 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 Q96M66 194 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 PACRGQ96M98 296 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 WFIKKN1Q96NZ8 548 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 UCN2Q96RP3 112 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ATG101Q9BSB4 218 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 CHD3Q12873 2000 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 PROB1E7EW31 1015 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 M0R135 149 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 OR7C1O76099 320 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 CMTM1Q8IZ96 169 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF441Q8N8Z8 693 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 GTF3AQ92664 365 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 TVP23CQ96ET8 276 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF799Q96GE5 643 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 OPA3Q9H6K4 179 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 TERTO14746 1132 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 HMGB3O15347 200 aaKnown RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 TMEM50AO95807 157 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 CFHR1Q03591 330 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 COL13A1Q5TAT6 717 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF385CQ66K41 422 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 THNSL2Q86YJ6 484 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 C1QL4Q86Z23 238 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 PLPP5Q8NEB5 264 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZDHHC12Q96GR4 267 aa17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 FOXD3Q9UJU5 478 aaPredicted RBP17.78■□□□□ 0.44
MAP1LC3B-206ENST00000564844 ZNF695Q8IW36 515 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms