RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 DYNAPQ8N1N2 210 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 OR5D14Q8NGL3 314 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 CITED1Q99966 193 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 C16orf95Q9H693 158 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 GLS2Q9UI32 602 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 LINC00312Q9Y6C7 94 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 PKD1L1Q8TDX9 2849 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 MGST3O14880 152 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 RPSAP08865 295 aaKnown RBP16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 TMEM225BP0DP42 221 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 DCKP27707 260 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 P2RX3P56373 397 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 CDK5R1Q15078 307 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 KISS1Q15726 138 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 ASPHD2Q6ICH7 369 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 SAXO1Q8IYX7 474 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 PACRGLQ8N7B6 248 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 OR51A2Q8NGJ7 313 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 OR13D1Q8NGV5 346 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 HAVCR2Q8TDQ0 301 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 TAS2R4Q9NYW5 299 aa16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 SIRT4Q9Y6E7 314 aaPredicted RBP16.19■□□□□ 0.18
SHCBP1-203ENST00000564272 SH2D1BO14796 132 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 TSPAN9O75954 239 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 CLPXO76031 633 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 ALX3O95076 343 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 ADARB1P78563 741 aaKnown RBP16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 SCN1BQ07699 218 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 AANATQ16613 207 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 LDLRAD2Q5SZI1 272 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 TTC23Q5W5X9 447 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 ZNF626Q68DY1 528 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 RPL22L1Q6P5R6 122 aaKnown RBP16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 TREML4Q6UXN2 200 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 TMPRSS11AQ6ZMR5 421 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 TRAPPC6BQ86SZ2 158 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 PPP1R35Q8TAP8 253 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 RPS4Y2Q8TD47 263 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 CLEC2DQ9UHP7 191 aa16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 DIMT1Q9UNQ2 313 aaKnown RBP16.18■□□□□ 0.18
SHCBP1-203ENST00000564272 IRGMA1A4Y4 181 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 FAM90A8PA6NJQ4 464 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 MMP23AO75900 390 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 ZNF44P15621 663 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 RAB3AP20336 220 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 DYNC1I2Q13409 638 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 CCDC58Q4VC31 144 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 ZNF529Q6P280 563 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 Q6P435 159 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 DHRSXQ8N5I4 330 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 SETD9Q8NE22 299 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 OR11H6Q8NGC7 330 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 PIFOQ8TCI5 191 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 GPR148Q8TDV2 347 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 NKX3-1Q99801 234 aaPredicted RBP16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 C8orf4Q9NR00 106 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 EXOSC1Q9Y3B2 195 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 TBL2Q9Y4P3 447 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 PCDHGB5Q9Y5G0 923 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 SESN1Q9Y6P5 492 aa16.17■□□□□ 0.18
SHCBP1-203ENST00000564272 ANKRD65E5RJM6 399 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 GABRPO00591 440 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 CHST1O43916 411 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 LALBAP00709 142 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 MYL12AP19105 171 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 ERP29P30040 261 aaKnown RBP16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 SLC35E4Q6ICL7 350 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 SATL1Q86VE3 508 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 OR13C5Q8NGS8 318 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 FOXRED1Q96CU9 486 aaPredicted RBP16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 RHOFQ9HBH0 211 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 ING3Q9NXR8 418 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 SIGLEC9Q9Y336 463 aa16.16■□□□□ 0.18
SHCBP1-203ENST00000564272 IGHV2-26A0A0B4J1V2 119 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 A0A0G2JK05 382 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 SLC33A1O00400 549 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 GNAO1P09471 354 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 LMO1P25800 156 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 GABRA5P31644 462 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 GLIPR1P48060 266 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 AESQ08117 197 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 ATXN7L3Q14CW9 347 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 FAM189A2Q15884 450 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 SSX2Q16385 188 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 OGFRL1Q5TC84 451 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 PRAMEF5Q5TYX0 476 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 BAIAP2L2Q6UXY1 529 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 TNFAIP8L1Q8WVP5 186 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 COQ2Q96H96 371 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 TMEM80Q96HE8 168 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 GPER1Q99527 375 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 FAM192AQ9GZU8 254 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 BABAM2Q9NXR7 383 aa16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 UBE2J1Q9Y385 318 aaPredicted RBP16.15■□□□□ 0.18
SHCBP1-203ENST00000564272 MEGF11A6BM72 1044 aa16.14■□□□□ 0.17
SHCBP1-203ENST00000564272 VGLL3A8MV65 326 aa16.14■□□□□ 0.17
SHCBP1-203ENST00000564272 MAGEB3O15480 346 aa16.14■□□□□ 0.17
SHCBP1-203ENST00000564272 OGG1O15527 345 aa16.14■□□□□ 0.17
SHCBP1-203ENST00000564272 CD2P06729 351 aa16.14■□□□□ 0.17
SHCBP1-203ENST00000564272 JUNBP17275 347 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms