RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.66□□□□□ -0.861e-6■■□□□ 14.2
TCF4-222ENST00000564228 GOLT1BQ9Y3E0 138 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 LSM5Q9Y4Y9 91 aaKnown RBP9.66□□□□□ -0.86
TCF4-222ENST00000564228 FREM2Q5SZK8 3169 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 NR2C1P13056 603 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 PI3P19957 117 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 GLRA1P23415 457 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 G0S2P27469 103 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 OTX2P32243 289 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 OR3A2P47893 321 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 RND3P61587 244 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 RSPO4Q2I0M5 234 aaPredicted RBP9.66□□□□□ -0.86
TCF4-222ENST00000564228 SP5Q6BEB4 398 aaPredicted RBP9.66□□□□□ -0.86
TCF4-222ENST00000564228 SPSB3Q6PJ21 355 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 DEGS2Q6QHC5 323 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 PRR22Q8IZ63 422 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 NFAM1Q8NET5 270 aaPredicted RBP9.66□□□□□ -0.86
TCF4-222ENST00000564228 JSRP1Q96MG2 331 aaPredicted RBP9.66□□□□□ -0.86
TCF4-222ENST00000564228 WWTR1Q9GZV5 400 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 VSX1Q9NZR4 365 aaPredicted RBP9.66□□□□□ -0.86
TCF4-222ENST00000564228 V9GYS6 101 aa9.66□□□□□ -0.86
TCF4-222ENST00000564228 EML6Q6ZMW3 1958 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 TRBV11-1A0A0K0K1C0 115 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 PRSS37A4D1T9 235 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 H0YL77 283 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 SCAF4O95104 1147 aaKnown RBP9.65□□□□□ -0.86
TCF4-222ENST00000564228 TK1P04183 234 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 CTSDP07339 412 aaPredicted RBP9.65□□□□□ -0.86
TCF4-222ENST00000564228 ZNF25P17030 456 aaPredicted RBP9.65□□□□□ -0.86
TCF4-222ENST00000564228 HLA-DRB3P79483 266 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 EGR4Q05215 589 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 ICAM4Q14773 271 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 C21orf62-AS1Q17RA5 79 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 TMEM176BQ3YBM2 270 aaPredicted RBP9.65□□□□□ -0.86
TCF4-222ENST00000564228 SLC25A26Q70HW3 274 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 TMPRSS7Q7RTY8 843 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 IL22RA1Q8N6P7 574 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 BCORP1Q8N888 145 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 OR52N4Q8NGI2 321 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 OR1P1Q8NH06 330 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 ADIPOR1Q96A54 375 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 SH3BGRL3Q9H299 93 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 EMC9Q9Y3B6 208 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 URGCP-MRPS24S4R325 110 aa9.65□□□□□ -0.86
TCF4-222ENST00000564228 LOC102723996A0A087X1L8 192 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 IGHV1-45A0A0A0MS14 117 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 A0A0A6YYD4 124 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 FRG2CA6NGY1 282 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 CLDN34H7C241 214 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 C1QL1O75973 258 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 MBPP02686 304 aaPredicted RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 EPHA1P21709 976 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 PCOLCEQ15113 449 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 CYB5R2Q6BCY4 276 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 TMEM182Q6ZP80 229 aaPredicted RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 SLC16A14Q7RTX9 510 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 PRR18Q8N4B5 295 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 OR10J5Q8NHC4 309 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 KCNG3Q8TAE7 436 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 ZNF519Q8TB69 540 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 RBMXL1Q96E39 390 aaKnown RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 BSCL2Q96G97 398 aaPredicted RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 YLPM1P49750 1951 aaKnown RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 LOC101059948A0A1B0GTJ6 334 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 CRYM-AS1A6NIL9 109 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 RRP8O43159 456 aaKnown RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 CYB5R3P00387 301 aaPredicted RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 OPN1MWP04001 364 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 PGA4P0DJD7 388 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 PGA5P0DJD9 388 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 OPN1MW2P0DN77 364 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 OPN1MW3P0DN78 364 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 COX6A1P12074 109 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 KLK2P20151 261 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 ERVFC1-1P60608 527 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 DCAF7P61962 342 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 HAGHQ16775 308 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.64□□□□□ -0.87
TCF4-222ENST00000564228 PLAC9Q5JTB6 97 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 FNDC7Q5VTL7 733 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 PLXDC2Q6UX71 529 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 C16orf47Q6ZP98 133 aaPredicted RBP9.64□□□□□ -0.87
TCF4-222ENST00000564228 SEMA6DQ8NFY4 1073 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 SNX22Q96L94 193 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 ATG101Q9BSB4 218 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 NICN1Q9BSH3 213 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 CTDSP1Q9GZU7 261 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 WSB1Q9Y6I7 421 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 CNTRLQ7Z7A1 2325 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 DCHS1Q96JQ0 3298 aa9.64□□□□□ -0.87
TCF4-222ENST00000564228 PCNX3Q9H6A9 2034 aa9.63□□□□□ -0.87
TCF4-222ENST00000564228 MED13Q9UHV7 2174 aa9.63□□□□□ -0.87
TCF4-222ENST00000564228 NSG1A0A0A6YYJ2 146 aa9.63□□□□□ -0.87
TCF4-222ENST00000564228 FAM230AA0A1W2PPH8 454 aa9.63□□□□□ -0.87
TCF4-222ENST00000564228 A6NIZ1 184 aa9.63□□□□□ -0.87
TCF4-222ENST00000564228 TMEM210A6NLX4 147 aa9.63□□□□□ -0.87
TCF4-222ENST00000564228 C21orf140B9A014 251 aa9.63□□□□□ -0.87
TCF4-222ENST00000564228 LMX1BO60663 402 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms