RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 PEX14O75381 377 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 GATBO75879 557 aaKnown RBP12.88□□□□□ -0.35
RNF40-205ENST00000563909 PTBP3O95758 552 aaKnown RBP12.88□□□□□ -0.35
RNF40-205ENST00000563909 GYPAP02724 150 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 PF4P02776 101 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 CD2P06729 351 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 LMO1P25800 156 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 MLLT11Q13015 90 aaPredicted RBP12.88□□□□□ -0.35
RNF40-205ENST00000563909 PLCXD3Q63HM9 321 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 FGFRL1Q8N441 504 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 OR51A4Q8NGJ6 313 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
RNF40-205ENST00000563909 C17orf50Q8WW18 174 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 FCGR1BQ92637 280 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 DPF1Q92782 380 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 UFD1Q92890 307 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 RNF170Q96K19 258 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 PGLYRP3Q96LB9 341 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 DCTN5Q9BTE1 182 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 ZNF702PQ9H963 129 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 GPR173Q9NS66 373 aa12.88□□□□□ -0.35
RNF40-205ENST00000563909 MEGF11A6BM72 1044 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 OR5B21A6NL26 309 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 TMEM210A6NLX4 147 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 GRPP07492 148 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 GNG3P63215 75 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 CEP78Q5JTW2 689 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 KCTD8Q6ZWB6 473 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 SERPINA12Q8IW75 414 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 MS4A15Q8N5U1 240 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 Q8N7P7 452 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 LY6G5BQ8NDX9 201 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 ADAT3Q96EY9 351 aaPredicted RBP12.87□□□□□ -0.35
RNF40-205ENST00000563909 NR1H4Q96RI1 486 aaPredicted RBP12.87□□□□□ -0.35
RNF40-205ENST00000563909 MGLLQ99685 303 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 CHST5Q9GZS9 411 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 SLC7A11Q9UPY5 501 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 PCLOQ9Y6V0 5065 aa12.87□□□□□ -0.35
RNF40-205ENST00000563909 A0A087WXM4 84 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 TRBV5-5A0A0J9YX44 114 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 ZNF732B4DXR9 585 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 OCM2P0CE71 109 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 SOX2P48431 317 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 UBE2E1P51965 193 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 TPBGQ13641 420 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 CNN3Q15417 329 aaKnown RBP12.86□□□□□ -0.35
RNF40-205ENST00000563909 LRRC75BQ2VPJ9 315 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 Q499Y3 187 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 FAM76BQ5HYJ3 339 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 NKAPLQ5M9Q1 402 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 UBE2UQ5VVX9 321 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 FAM90A1Q86YD7 464 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 PARP16Q8N5Y8 322 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 OR1M1Q8NGA1 313 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 OR5D14Q8NGL3 314 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 HPSE2Q8WWQ2 592 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 RGP1Q92546 391 aaPredicted RBP12.86□□□□□ -0.35
RNF40-205ENST00000563909 THRSPQ92748 146 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 NEK6Q9HC98 313 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 C1orf123Q9NWV4 160 aa12.86□□□□□ -0.35
RNF40-205ENST00000563909 A6NLC8 198 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 ANGPTL7O43827 346 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 LYL1P12980 280 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 CPEP16870 476 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 ATF1P18846 271 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 PAX6P26367 422 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 GPM6AP51674 278 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 FUT6P51993 359 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 TRAM1Q15629 374 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 UBE2V2Q15819 145 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 LIPKQ5VXJ0 399 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 GCSAMQ8N6F7 178 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 TSPAN14Q8NG11 270 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 OPALINQ96PE5 141 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 KAAG1Q9UBP8 84 aa12.85□□□□□ -0.35
RNF40-205ENST00000563909 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 CHRM2P08172 466 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 OCMP0CE72 109 aaPredicted RBP12.84□□□□□ -0.35
RNF40-205ENST00000563909 PRKACBP22694 351 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
RNF40-205ENST00000563909 BMXP51813 675 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
RNF40-205ENST00000563909 LIAT1Q6ZQX7 453 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 ZNF826PQ6ZT77 177 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 Q8N2B8 174 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 DNAAF1Q8NEP3 725 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 OR13C5Q8NGS8 318 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 TMEM106AQ96A25 262 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 SPSB1Q96BD6 273 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 BORCS8Q96FH0 119 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 ASCL2Q99929 193 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 WNT10AQ9GZT5 417 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 FGF23Q9GZV9 251 aaPredicted RBP12.84□□□□□ -0.35
RNF40-205ENST00000563909 TLNRD1Q9H1K6 362 aa12.84□□□□□ -0.35
RNF40-205ENST00000563909 PALMDQ9NP74 551 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms