RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 BAG2O95816 211 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 OR2H2O95918 312 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 CSF1P09603 554 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 ZNF44P15621 663 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 JUNBP17275 347 aaPredicted RBP14.29□□□□□ -0.12
NME3-205ENST00000563854 KIR2DS4P43632 304 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 EFNB2P52799 333 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 P2RX3P56373 397 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 SLC34A1Q06495 639 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 HERPUD1Q15011 391 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 ZNF146Q15072 292 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 LDLRAD2Q5SZI1 272 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 CRIP3Q6Q6R5 217 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 LIAT1Q6ZQX7 453 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 PQLC1Q8N2U9 271 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 OR11H6Q8NGC7 330 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 MALSU1Q96EH3 234 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 PDCD1LG2Q9BQ51 273 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 ZCCHC4Q9H5U6 513 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 RANBP3Q9H6Z4 567 aaPredicted RBP14.29□□□□□ -0.12
NME3-205ENST00000563854 ERVK13-1Q9NX77 482 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 DHDHQ9UQ10 334 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 TCF19Q9Y242 345 aa14.29□□□□□ -0.12
NME3-205ENST00000563854 IGHV2-26A0A0B4J1V2 119 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 FAM172BPA6NC97 362 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 E9PI62 339 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 F2RL2O00254 374 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 VWFP04275 2813 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 TMEM225BP0DP42 221 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 GBX2P52951 348 aaPredicted RBP14.28□□□□□ -0.12
NME3-205ENST00000563854 HABP2Q14520 560 aaPredicted RBP14.28□□□□□ -0.12
NME3-205ENST00000563854 PDLIM3Q53GG5 364 aaPredicted RBP14.28□□□□□ -0.12
NME3-205ENST00000563854 ARSJQ5FYB0 599 aaPredicted RBP14.28□□□□□ -0.12
NME3-205ENST00000563854 PRAMEF5Q5TYX0 476 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 SYS1Q8N2H4 156 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 OR52I1Q8NGK6 324 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 OR5AK2Q8NH90 309 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 RHOXF1Q8NHV9 184 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 CLEC7AQ9BXN2 247 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 TMEM133Q9H2Q1 129 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 FAM118AQ9NWS6 357 aa14.28□□□□□ -0.12
NME3-205ENST00000563854 TET2Q6N021 2002 aaPredicted RBP14.27□□□□□ -0.12
NME3-205ENST00000563854 TRGV10A0A0A0MS01 117 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 TMEM212A6NML5 194 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 VGLL3A8MV65 326 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 EBAG9O00559 213 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 SULT1B1O43704 296 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 MMP23AO75900 390 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 KDM4BO94953 1096 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 ZFPL1O95159 310 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 MT-ND2P03891 347 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 CCDC159P0C7I6 412 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 AESQ08117 197 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 RAB40BQ12829 278 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 C11orf88Q6PI97 169 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 CCBE1Q6UXH8 406 aaPredicted RBP14.27□□□□□ -0.13
NME3-205ENST00000563854 BAIAP2L2Q6UXY1 529 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 C1QL4Q86Z23 238 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 SEBOXQ9HB31 216 aaPredicted RBP14.27□□□□□ -0.13
NME3-205ENST00000563854 INPP5EQ9NRR6 644 aa14.27□□□□□ -0.13
NME3-205ENST00000563854 RPL36Q9Y3U8 105 aaKnown RBP14.27□□□□□ -0.13
NME3-205ENST00000563854 DSCAML1Q8TD84 2053 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 CMYA5Q8N3K9 4069 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 HSPB6O14558 160 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 GLIPR1P48060 266 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 SOX2P48431 317 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 IL18R1Q13478 541 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 ATXN7L3Q14CW9 347 aaPredicted RBP14.26□□□□□ -0.13
NME3-205ENST00000563854 SERPINA12Q8IW75 414 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 ZNF555Q8NEP9 628 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 OR5D14Q8NGL3 314 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 APH1BQ8WW43 257 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 GAL3ST2Q9H3Q3 398 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 ZNF702PQ9H963 129 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
NME3-205ENST00000563854 UBE2J1Q9Y385 318 aaPredicted RBP14.26□□□□□ -0.13
NME3-205ENST00000563854 FUOMA2VDF0 154 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 MEGF11A6BM72 1044 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 A6NDX4 124 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 CDK2P24941 298 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 ERP29P30040 261 aaKnown RBP14.25□□□□□ -0.13
NME3-205ENST00000563854 GTF2A1P52655 376 aaPredicted RBP14.25□□□□□ -0.13
NME3-205ENST00000563854 MRPL28Q13084 256 aaKnown RBP14.25□□□□□ -0.13
NME3-205ENST00000563854 KISS1Q15726 138 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 SMN1Q16637 294 aaKnown RBP14.25□□□□□ -0.13
NME3-205ENST00000563854 ZSCAN26Q16670 478 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 KLHL22Q53GT1 634 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 KRBOX4Q5JUW0 171 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 MINOS1Q5TGZ0 78 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 ZNF691Q5VV52 312 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 SATL1Q86VE3 508 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 SAXO1Q8IYX7 474 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 LYG1Q8N1E2 194 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 STMN2Q93045 179 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 OR5M11Q96RB7 305 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 NR1H4Q96RI1 486 aaPredicted RBP14.25□□□□□ -0.13
NME3-205ENST00000563854 GPER1Q99527 375 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 FAM192AQ9GZU8 254 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 MINOS1-NBL1R4GNA1 71 aa14.25□□□□□ -0.13
NME3-205ENST00000563854 WNK1Q9H4A3 2382 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms