RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 PRKACBP22694 351 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 DNASE1P24855 282 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 MPZP25189 248 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 MAPK3P27361 379 aaPredicted RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 FGF9P31371 208 aaPredicted RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 TGFBR1P36897 503 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 RPL5P46777 297 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 PTH2RP49190 550 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 SRP9P49458 86 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 NPY4RP50391 375 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 GPM6AP51674 278 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 FUT6P51993 359 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 EFNA4P52798 201 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 ZP1P60852 638 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 GNG3P63215 75 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 TNFAIP6P98066 277 aaPredicted RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 HOXA4Q00056 320 aaPredicted RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 DEFB113Q30KQ7 82 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 HSD17B12Q53GQ0 312 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 C22orf42Q6IC83 251 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 TMEM88Q6PEY1 159 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 GLDNQ6ZMI3 551 aaPredicted RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 ZNF826PQ6ZT77 177 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 ANGPTL5Q86XS5 388 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 CALHM1Q8IU99 346 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 SERPINA12Q8IW75 414 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 OR52L2PQ8NGH6 319 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 OR52N4Q8NGI2 321 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 OR5D14Q8NGL3 314 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 OR8S1Q8NH09 359 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 TRMT10AQ8TBZ6 339 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 ZFAND2BQ8WV99 257 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 NEU4Q8WWR8 484 aaPredicted RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 PHYHIPQ92561 330 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 THRSPQ92748 146 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 YIPF5Q969M3 257 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 RFT1Q96AA3 541 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 SPSB1Q96BD6 273 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 RNF170Q96K19 258 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 TECTBQ96PL2 329 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 SPACA5Q96QH8 159 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 NKX3-1Q99801 234 aaPredicted RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 SPXQ9BT56 116 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 RTL8AQ9BWD3 113 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 FUNDC2Q9BWH2 189 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 RAB1BQ9H0U4 201 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 RBM38Q9H0Z9 239 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 SAP30LQ9HAJ7 183 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 EXOSC4Q9NPD3 245 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 SNTG1Q9NSN8 517 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 TXNL4BQ9NX01 149 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 FOXJ3Q9UPW0 622 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 POMT1Q9Y6A1 747 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 CREBBPQ92793 2442 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 HEATR1Q9H583 2144 aaKnown RBP4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 ARFGEF3Q5TH69 2177 aa4.36□□□□□ -1.71
HERPUD1-207ENST00000563781 ZNF469Q96JG9 3925 aaPredicted RBP4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 ZANQ9Y493 2812 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 TRAV1-2A0A0B4J238 106 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 IGKV1-12A0A0C4DH73 117 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 A0A0G2JK05 382 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 IGHV1-69-2A0A0G2JMI3 117 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 LOC100506127A0A0U1RQW1 187 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 A4D1N5 150 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 FAM90A8PA6NJQ4 464 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 CDIPTO14735 213 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 SYNGR1O43759 233 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 AIREO43918 545 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 RHBDL1O75783 438 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 ARL6IP5O75915 188 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 IGKV1D-12P01611 117 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 HOXB5P09067 269 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 FAM90A13PP0C7W8 464 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 FAM90A24PP0C7X0 464 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 DAOP14920 347 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 SRMP19623 302 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 COL8A2P25067 703 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 BDKRB2P30411 391 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 CFHR2P36980 270 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 RBP2P50120 134 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 ATP5J2P56134 94 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 OR10A3P58181 314 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 PPP3R1P63098 170 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 MRPS11P82912 194 aaKnown RBP4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 PDZK1IP1Q13113 114 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 CTF1Q16619 201 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 ZNF181Q2M3W8 571 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 C1orf100Q5SVJ3 147 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 FAM201AQ5SY85 155 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 DDI2Q5TDH0 399 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 GPR107Q5VW38 600 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 FAM166AQ6J272 317 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 HAGHLQ6PII5 290 aaPredicted RBP4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 WDR82Q6UXN9 313 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 GDPGP1Q6ZNW5 385 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 Q6ZRM9 215 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 DNM1P46Q6ZS02 220 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 C1QL2Q7Z5L3 287 aa4.35□□□□□ -1.71
HERPUD1-207ENST00000563781 GPR141Q7Z602 305 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms