RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 hADV38S2A0JD32 116 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 EVPLLA8MZ36 301 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 OOSP1A8MZH6 123 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 H0Y980 276 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 K7N7A8 449 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 SDHDO14521 159 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 TOR1AO14656 332 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 SPAG7O75391 227 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 MMP23AO75900 390 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 NXPH2O95156 264 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 IGLV1-51P01701 117 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 TFAP2AP05549 437 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ANXA2P07355 339 aaKnown RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 BPGMP07738 259 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 RBMY1A1P0DJD3 496 aaKnown RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 CFL1P23528 166 aaKnown RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 OTX1P32242 354 aaPredicted RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 CDKN2AP42771 156 aaKnown RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 PTTG1IPP53801 180 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ZP1P60852 638 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ABCE1P61221 599 aaKnown RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 EWSR1Q01844 656 aaKnown RBP eCLIP4.03□□□□□ -1.76
HERC1-213ENST00000561359 MEF2CQ06413 473 aaPredicted RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 EIF2B1Q14232 305 aaKnown RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 KRT71Q3SY84 523 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 BAIAP2L2Q6UXY1 529 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 TRAPPC6BQ86SZ2 158 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ADCK1Q86TW2 530 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 RTN4RL2Q86UN3 420 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 CROCCP3Q8IVE0 287 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 MSRB3Q8IXL7 192 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 NRMQ8IXM6 262 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ZDHHC23Q8IYP9 409 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ZNF491Q8N8L2 437 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 OR9I1Q8NGQ6 314 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 MYOZ3Q8TDC0 251 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 PHLDA1Q8WV24 401 aaPredicted RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 TSEN15Q8WW01 171 aaKnown RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 HPSE2Q8WWQ2 592 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 PIGCQ92535 297 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 RGP1Q92546 391 aaPredicted RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 RPEQ96AT9 228 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ZNF488Q96MN9 340 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 KCTD7Q96MP8 289 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 NRIP2Q9BQI9 281 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 CHCHD6Q9BRQ6 235 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 FGF23Q9GZV9 251 aaPredicted RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 ALX4Q9H161 411 aaPredicted RBP4.03□□□□□ -1.76
HERC1-213ENST00000561359 ABCG5Q9H222 651 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 KLK15Q9H2R5 256 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 TMBIM4Q9HC24 238 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 SCRT2Q9NQ03 307 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 CENPMQ9NSP4 180 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 RHBDL2Q9NX52 303 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 PTTG2Q9NZH5 202 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 ZIM2Q9NZV7 527 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 B9D1Q9UPM9 204 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 CORO2BQ9UQ03 480 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 RAP2CQ9Y3L5 183 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 IER3IP1Q9Y5U9 82 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 hCG_38984A0A1B0GV85 526 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 SMIM31A0A1B0GVY4 71 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 GAGE12BA1L429 117 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 GAGE12HA6NDE8 117 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A18PA6NE21 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A16PA6NEW6 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A20PA6NIJ5 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM183AA6NL82 134 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A9PA6NNJ1 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A12PA8MX19 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A5PA8MXJ8 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 ZNF732B4DXR9 585 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 DIRC3C9JPN6 131 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 BUB1B-PAK6H3BSN5 160 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 IDH3BO43837 385 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 TYROBPO43914 113 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 ATP5HO75947 161 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 CDK2AP2O75956 126 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 NUDT3O95989 172 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 IGKV1D-33P01593 117 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 IGKV1-33P01594 117 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 IGLV1-47P01700 117 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A15PP0C7V4 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A13PP0C7W8 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A14PP0C7W9 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 FAM90A24PP0C7X0 464 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 GSTT2P0CG29 244 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 GSTT2BP0CG30 244 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 HOXB9P17482 250 aaPredicted RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 GPX2P18283 190 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 TNFRSF1BP20333 461 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 RPS27P42677 84 aaKnown RBP4.02□□□□□ -1.77
HERC1-213ENST00000561359 GPR4P46093 362 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 PRRX1P54821 245 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 SCAND1P57086 179 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 RAP2BP61225 183 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 GNG3P63215 75 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 CFHR3Q02985 330 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 ST3GAL3Q11203 375 aa4.02□□□□□ -1.77
HERC1-213ENST00000561359 BNIP1Q12981 228 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms