RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TPBGQ13641 420 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 ZNF273Q14593 569 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 MED22Q15528 200 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 DEFB112Q30KQ8 113 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 DDI2Q5TDH0 399 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 TCF23Q7RTU1 214 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 FAM185AQ8N0U4 392 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 PIP4P2Q8N4L2 257 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 OR4S1Q8NGB4 309 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 OR5D13Q8NGL4 314 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 ZFAND2BQ8WV99 257 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 TNFAIP8L1Q8WVP5 186 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 C19orf24Q9BVV8 132 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 NOX4Q9NPH5 578 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 FOXJ3Q9UPW0 622 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 GSTK1Q9Y2Q3 226 aa12.51□□□□□ -0.41
SNRPA1-213ENST00000560856 SH2D1BO14796 132 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 MAGEB3O15480 346 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 CCL3L1P16619 93 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 ZNF93P35789 620 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 MTNR1BP49286 362 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 KLRD1Q13241 179 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 ACSM3Q53FZ2 586 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 FIP1L1Q6UN15 594 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 MS4A15Q8N5U1 240 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 OR51T1Q8NGJ9 327 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 OR10K1Q8NGX5 313 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 CPNE2Q96FN4 548 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 JMJD8Q96S16 334 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 GPER1Q99527 375 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 CHST6Q9GZX3 395 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 PPIL3Q9H2H8 161 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 METTL8Q9H825 291 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 ISYNA1Q9NPH2 558 aa12.5□□□□□ -0.41
SNRPA1-213ENST00000560856 A0A0G2JK05 382 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 SIRPB1O00241 398 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 CDRT1O95170 752 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 ERVFRD-1P60508 538 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 UBA52P62987 128 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 FAM27D1Q5T7N8 215 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 LIPKQ5VXJ0 399 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 TBC1D15Q8TC07 691 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 CCDC90BQ9GZT6 254 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 EXOSC4Q9NPD3 245 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 IL36GQ9NZH8 169 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 GLS2Q9UI32 602 aa12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 SF3B6Q9Y3B4 125 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-213ENST00000560856 DNAJC9-AS1A6NH13 148 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 C17orf98A8MV24 154 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 SLC33A1O00400 549 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 MGST3O14880 152 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 CD37P11049 281 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 GABRR1P24046 479 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 ERP29P30040 261 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 BMXP51813 675 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 MEF2CQ06413 473 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 MLLT11Q13015 90 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 TBCEQ15813 527 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 GRK1Q15835 563 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 KIAA2026Q5HYC2 2103 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 TMEM91Q6ZNR0 172 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 GDPD3Q7L5L3 318 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 CDH26Q8IXH8 852 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 PNKDQ8N490 385 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 TPRX1Q8N7U7 411 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 SPATA3Q8NHX4 192 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 FAM216AQ8WUB2 273 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 THRSPQ92748 146 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 TMED9Q9BVK6 235 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 ZNF581Q9P0T4 197 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 CKLFQ9UBR5 152 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 BLOC1S6Q9UL45 172 aa12.48□□□□□ -0.41
SNRPA1-213ENST00000560856 TRAV24A0A0B4J272 114 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 A0A0U1RQK1 487 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 MEX3AA1L020 520 aaKnown RBP12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 CLDN34H7C241 214 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 MAS1P04201 325 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 ZNF728P0DKX0 622 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 CPEP16870 476 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 UBE2E1P51965 193 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 EDDM3BP56851 147 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 GABARAPL2P60520 117 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 GUCA2AQ02747 115 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 BAMBIQ13145 260 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 BLMHQ13867 455 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 EDDM3AQ14507 147 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 IL13RA2Q14627 380 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 RSU1Q15404 277 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 SLC9A3R2Q15599 337 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 PIGYQ3MUY2 71 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 NCR3LG1Q68D85 454 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 RBMS3Q6XE24 437 aaKnown RBP12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 Q6YL49 198 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 LRRTM1Q86UE6 522 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 CHST4Q8NCG5 386 aa12.47□□□□□ -0.41
SNRPA1-213ENST00000560856 UFD1Q92890 307 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms