RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RNF183Q96D59 192 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 OR2J1Q9GZK6 312 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 FOXJ2Q9P0K8 574 aa5.84□□□□□ -1.48
TSPAN3-209ENST00000560715 TRAV18A0A075B6X5 111 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 A0A0D9SEW6 157 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 RPP14O95059 124 aaKnown RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 ETHE1O95571 254 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 IGSF6O95976 241 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 MMP7P09237 267 aaPredicted RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 CX3CR1P49238 355 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 NOVA1P51513 510 aaKnown RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 H3F3AP84243 136 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 CYCSP99999 105 aaKnown RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 COA6Q5JTJ3 125 aaKnown RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 RPL7L1Q6DKI1 246 aaKnown RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 TMEM205Q6UW68 189 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 SLC25A42Q86VD7 318 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 C17orf64Q86WR6 236 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 LRTM2Q8N967 370 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 PBDC1Q9BVG4 233 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 COMMD4Q9H0A8 199 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 VAX2Q9UIW0 290 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 URGCP-MRPS24S4R325 110 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 PIKFYVEQ9Y2I7 2098 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 RS1O15537 224 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 P2RX6O15547 441 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 HLA-DQA2P01906 255 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 PGA4P0DJD7 388 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 PGA5P0DJD9 388 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 OR13C7P0DN81 318 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 ATP1B2P14415 290 aaPredicted RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 APOBEC1P41238 236 aaKnown RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 RAB7AP51149 207 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 ACTBP60709 375 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 ACTG1P63261 375 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF763Q0D2J5 394 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 PRR27Q6MZM9 219 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 PRSS54Q6PEW0 395 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 Q6ZWC4 215 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 SLC39A11Q8N1S5 342 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 TMEM229BQ8NBD8 167 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 STXBP6Q8NFX7 210 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 OR1P1Q8NH06 330 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 OR5AK2Q8NH90 309 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 SMARCD2Q92925 531 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 SEH1LQ96EE3 360 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 NEURL3Q96EH8 262 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 SMIM14Q96QK8 99 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 SMDT1Q9H4I9 107 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 ADGRL4Q9HBW9 690 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 TBX21Q9UL17 535 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 KLHDC2Q9Y2U9 406 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 YIPF1Q9Y548 306 aa5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 PCYT1BQ9Y5K3 369 aaPredicted RBP5.83□□□□□ -1.48
TSPAN3-209ENST00000560715 A0A1B0GW64 132 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 K7EPK0 472 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 GEMIN2O14893 280 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 INSIG1O15503 277 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 EFNA2O43921 213 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 WISP2O76076 250 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 WNT11O96014 354 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 CST4P01036 141 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 UMODP07911 640 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 RHOCP08134 193 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 MRPL3P09001 348 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 OR5H8P0DN80 308 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 FGF5P12034 268 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 CCNOP22674 350 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 PRSS3P35030 304 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 TSFMP43897 325 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 RPS24P62847 133 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 ACTC1P68032 377 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 ACTA1P68133 377 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 LTBQ06643 244 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 ZFP36L1Q07352 338 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 PPP1R1AQ13522 171 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 RPL22L1Q6P5R6 122 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF101Q8IZC7 436 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 FAM71E2Q8N5Q1 922 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF615Q8N8J6 731 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 ORAOV1Q8WV07 137 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 ZNF48Q96MX3 618 aaPredicted RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 HCAR1Q9BXC0 346 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 CXXC4Q9H2H0 198 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 PRSS21Q9Y6M0 314 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 YLPM1P49750 1951 aaKnown RBP5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 CCDC88CQ9P219 2028 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 MEIS3P1A6NDR6 274 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 H3BQ15 152 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 SCGNO76038 276 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 P04436 131 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 CRYGBP07316 175 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 SLC35G6P0C7Q6 338 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 FOLR1P15328 257 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 PMCHP20382 165 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 MSR1P21757 451 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 CHRNB4P30926 498 aa5.82□□□□□ -1.48
TSPAN3-209ENST00000560715 GLIPR1P48060 266 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms