RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 MMP23AO75900 390 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 RPP14O95059 124 aaKnown RBP8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 LY86O95711 162 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 CST1P01037 141 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 PRKACAP17612 351 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 CDK2P24941 298 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 MPZP25189 248 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 MYCNOSP40205 109 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 MAGEA2P43356 314 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 POU3F4P49335 361 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 SLC35B1P78383 322 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 XP32Q5T750 250 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 BAIAP2L2Q6UXY1 529 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 SLC25A26Q70HW3 274 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 OR2W3Q7Z3T1 314 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 BORCS8Q96FH0 119 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 NOL4LQ96MY1 436 aaPredicted RBP8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 APOL4Q9BPW4 351 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 ADI1Q9BV57 179 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 MAGIXQ9H6Y5 334 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 MOB1AQ9H8S9 216 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 S100A14Q9HCY8 104 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 PALMDQ9NP74 551 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 TVP23BQ9NYZ1 205 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 IL36RNQ9UBH0 155 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 LINC00527Q9UJ94 153 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 OR52A1Q9UKL2 312 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 V9GYS6 101 aa8.33□□□□□ -1.08
CDC42BPB-207ENST00000560492 TCRBV3S1A0A5B6 114 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 MGST3O14880 152 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 MAGEB4O15481 346 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 IGLV3-1P01715 115 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 OCM2P0CE71 109 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 OCMP0CE72 109 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 FAM106CPP0CH98 169 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 NFYBP25208 207 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 ECI1P42126 302 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 LUMP51884 338 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 PRRX1P54821 245 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 CXCR4P61073 352 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 ERVK11-1P61568 191 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 SCN1BQ07699 218 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 HNF4GQ14541 408 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 TPTE2P1Q5T6R2 138 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 TMEM236Q5W0B7 351 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 CCDC144NLQ6NUI1 221 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 CD300LDQ6UXZ3 194 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 KRT74Q7RTS7 529 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 RTN4RL2Q86UN3 420 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 ENTHD1Q8IYW4 607 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 Q8NFD4 153 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 OR52N4Q8NGI2 321 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 OR4D6Q8NGJ1 314 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 OR14K1Q8NGZ2 314 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 CHPT1Q8WUD6 406 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 TOMM40LQ969M1 308 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 RPEQ96AT9 228 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 CREB3L1Q96BA8 519 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 CNN2Q99439 309 aaKnown RBP8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 MTCH1Q9NZJ7 389 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 COPS3Q9UNS2 423 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 UBE2J1Q9Y385 318 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 R4GMQ9 66 aa8.32□□□□□ -1.08
CDC42BPB-207ENST00000560492 FUOMA2VDF0 154 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 PRR32B1ATL7 298 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ZNF670-ZNF695F2Z2N8 137 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 SYT7O43581 403 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 GATBO75879 557 aaKnown RBP8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 SERPINA3P01011 423 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 AMY1AP04745 511 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 AMY2AP04746 511 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 FCGR1AP12314 374 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 OSMP13725 252 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 TMEM11P17152 192 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 HOXB6P17509 224 aaKnown RBP8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 SLC2A5P22732 501 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 PTGFRP43088 359 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 FUT6P51993 359 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 GP2P55259 537 aaKnown RBP8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 P2RX3P56373 397 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 BDH1Q02338 343 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ROM1Q03395 351 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ZNF91Q05481 1191 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 DOC2BQ14184 412 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 TMEM42Q69YG0 159 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ZNF322Q6U7Q0 402 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ZNF695Q8IW36 515 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 FOXRED2Q8IWF2 684 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 Q8IYB0 196 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ELMOD2Q8IZ81 293 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 FAM58AQ8N1B3 248 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 YIPF7Q8N8F6 280 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 OR5M8Q8NGP6 311 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ZNF286AQ9HBT8 521 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 EXOSC4Q9NPD3 245 aaKnown RBP8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 ZFP57Q9NU63 452 aa8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 RBFOX1Q9NWB1 397 aaKnown RBP8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 H2AFY2Q9P0M6 372 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPB-207ENST00000560492 DNAJB9Q9UBS3 223 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms