RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	SELENOI	Q9C0D9	397 aa		10.21	□□□□□ -0.77
USP8-209	ENST00000560297	DCSTAMP	Q9H295	470 aa		10.21	□□□□□ -0.77
USP8-209	ENST00000560297	BANF2	Q9H503	90 aa		10.21	□□□□□ -0.77
USP8-209	ENST00000560297	IFT22	Q9H7X7	185 aa		10.21	□□□□□ -0.77
USP8-209	ENST00000560297	RAB22A	Q9UL26	194 aa		10.21	□□□□□ -0.77
USP8-209	ENST00000560297	MAB21L2	Q9Y586	359 aa		10.21	□□□□□ -0.77
USP8-209	ENST00000560297	CSMD1	Q96PZ7	3565 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	SMIM31	A0A1B0GVY4	71 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297		A0A1W2PP11	408 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	CCDC160	A6NGH7	325 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297		K7N7A8	449 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	SMAD7	O15105	426 aa	Known RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297	LDLRAD4	O15165	306 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	MPIG6B	O95866	241 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	ECD	O95905	644 aa	Predicted RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297	OR2H2	O95918	312 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	TK1	P04183	234 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	SLC2A2	P11168	524 aa	Predicted RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297	ZNF44	P15621	663 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	RAB6A	P20340	208 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	IL2RG	P31785	369 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	SNU13	P55769	128 aa	Known RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297	RPS27A	P62979	156 aa	Known RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297	SCN1B	Q07699	218 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	IKZF1	Q13422	519 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	TAF9	Q16594	264 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	PIGY	Q3MUY2	71 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	IDNK	Q5T6J7	187 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	CYB5R2	Q6BCY4	276 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297		Q6P435	159 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	FAM216B	Q8N7L0	139 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	LINC01356	Q8N9X3	169 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	ZNRF1	Q8ND25	227 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	MAPK1IP1L	Q8NDC0	245 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	KCTD12	Q96CX2	325 aa	Known RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297		Q96M66	194 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	TMUB1	Q9BVT8	246 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	TM2D1	Q9BX74	207 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	SPACA1	Q9HBV2	294 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	ABRACL	Q9P1F3	81 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	IL36RN	Q9UBH0	155 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	CTSZ	Q9UBR2	303 aa		10.2	□□□□□ -0.78
USP8-209	ENST00000560297	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.2	□□□□□ -0.78
USP8-209	ENST00000560297	PPIAL4C	A0A0B4J2A2	164 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	FUOM	A2VDF0	154 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	METTL21EP	A6NDL7	271 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297		A8MXK9	166 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	GEMIN2	O14893	280 aa	Known RBP	10.19	□□□□□ -0.78
USP8-209	ENST00000560297	ZNF737	O75373	536 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	OR7C1	O76099	320 aa	Predicted RBP	10.19	□□□□□ -0.78
USP8-209	ENST00000560297	GLA	P06280	429 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	INHBB	P09529	407 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	IGHV4-31	P0DP07	118 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	GABRR1	P24046	479 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	SOX6	P35712	828 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	CEBPD	P49716	269 aa	Predicted RBP	10.19	□□□□□ -0.78
USP8-209	ENST00000560297	DYNC1I2	Q13409	638 aa	Known RBP	10.19	□□□□□ -0.78
USP8-209	ENST00000560297	UNC119	Q13432	240 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	OR10K2	Q6IF99	312 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	FAM89B	Q8N5H3	189 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	ASCC1	Q8N9N2	400 aa	Known RBP	10.19	□□□□□ -0.78
USP8-209	ENST00000560297	TMEM185A	Q8NFB2	350 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	NDNF	Q8TB73	568 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	FAM46B	Q96A09	425 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	DGCR14	Q96DF8	476 aa	Known RBP	10.19	□□□□□ -0.78
USP8-209	ENST00000560297	DMRTB1	Q96MA1	342 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	OR5V1	Q9UGF6	321 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	RSL24D1	Q9UHA3	163 aa	Known RBP	10.19	□□□□□ -0.78
USP8-209	ENST00000560297	ETV7	Q9Y603	341 aa		10.19	□□□□□ -0.78
USP8-209	ENST00000560297	MAP1A	P78559	2803 aa	Predicted RBP	10.18	□□□□□ -0.78
USP8-209	ENST00000560297	TEX15	Q9BXT5	2789 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	LOC105371242	A0A075B767	164 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	TRAV20	A0A0B4J274	112 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	TMEM272	A0A1B0GTI8	110 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	FAM157A	C9JC47	383 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297		H3BMQ9	156 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	SIRPB1	O00241	398 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	SLC33A1	O00400	549 aa	Predicted RBP	10.18	□□□□□ -0.78
USP8-209	ENST00000560297	MGST3	O14880	152 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	PHF1	O43189	567 aa	Predicted RBP	10.18	□□□□□ -0.78
USP8-209	ENST00000560297	TFF1	P04155	84 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	LIPF	P07098	398 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	MSMB	P08118	114 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	ZNF182	P17025	639 aa	Predicted RBP	10.18	□□□□□ -0.78
USP8-209	ENST00000560297	NDUFB7	P17568	137 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	FUT3	P21217	361 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	ZFP36	P26651	326 aa	Known RBP	10.18	□□□□□ -0.78
USP8-209	ENST00000560297	KCNJ3	P48549	501 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	SEC61A1	P61619	476 aa	Known RBP	10.18	□□□□□ -0.78
USP8-209	ENST00000560297	PDCD1	Q15116	288 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	DMRTA1	Q5VZB9	504 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	C17orf107	Q6ZR85	190 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	GDPD3	Q7L5L3	318 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	OR8H2	Q8N162	312 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	OR56B1	Q8NGI3	324 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	ACOT12	Q8WYK0	555 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	ST8SIA4	Q92187	359 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	AP3S1	Q92572	193 aa		10.18	□□□□□ -0.78
USP8-209	ENST00000560297	MSI2	Q96DH6	328 aa	Known RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms