RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 A0A0X1KG70 313 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 MEIS3P1A6NDR6 274 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 TMEM210A6NLX4 147 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 TRAPPC2LH3BP13 241 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 SOCS1O15524 211 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 RP2O75695 350 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 NXPH2O95156 264 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 GYPAP02724 150 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 ERCC1P07992 297 aaPredicted RBP4.36□□□□□ -1.71
SPG11-220ENST00000559933 ADH4P08319 380 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 PGA5P0DJD9 388 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 DAOP14920 347 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 GNB3P16520 340 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 TNFSF4P23510 183 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 CDK2P24941 298 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 MPZP25189 248 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 SRP9P49458 86 aaKnown RBP4.36□□□□□ -1.71
SPG11-220ENST00000559933 EVX1P49640 407 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 VEGFCP49767 419 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 RBM11P57052 281 aaKnown RBP4.36□□□□□ -1.71
SPG11-220ENST00000559933 ERVK11-1P61568 191 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 RPS27AP62979 156 aaKnown RBP4.36□□□□□ -1.71
SPG11-220ENST00000559933 SCN1BQ07699 218 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 IL24Q13007 206 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 ZMYND11Q15326 602 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 TAF9Q16594 264 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 FAM76BQ5HYJ3 339 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 PLAC9Q5JTB6 97 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 UBE2NLQ5JXB2 153 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 SIGIRRQ6IA17 410 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 CNIH2Q6PI25 160 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 ACP7Q6ZNF0 438 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 Q6ZPA2 131 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 DCDC5Q6ZRR9 648 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 FAM90A1Q86YD7 464 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 C1orf174Q8IYL3 243 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 OSR2Q8N2R0 312 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 BPIFB2Q8N4F0 458 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 CD177Q8N6Q3 437 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 FAM216BQ8N7L0 139 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 OR4M2Q8NGB6 313 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 C8orf49Q96NF6 230 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 TECTBQ96PL2 329 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 TMEM59Q9BXS4 323 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 PKIBQ9C010 78 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 CHST6Q9GZX3 395 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 SLC22A4Q9H015 551 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 ATG5Q9H1Y0 275 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 AUNIPQ9H7T9 357 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 FN3KRPQ9HA64 309 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 HMG20AQ9NP66 347 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 DLL4Q9NR61 685 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 CYSLTR2Q9NS75 346 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 TMEM106BQ9NUM4 274 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 FAIMQ9NVQ4 179 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 C14orf119Q9NWQ9 140 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 RHBDL2Q9NX52 303 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 NKIRAS2Q9NYR9 191 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 EXTL2Q9UBQ6 330 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 IL19Q9UHD0 177 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 ZDHHC8Q9ULC8 765 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 SPATA2Q9UM82 520 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 PPP1R3CQ9UQK1 317 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 V9GYH0 126 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 SPG11Q96JI7 2443 aa4.36□□□□□ -1.71
SPG11-220ENST00000559933 MYO9AB2RTY4 2548 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 TRAV39A0A0B4J263 110 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 UBE2QL1A1L167 161 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 MEIOCA2RUB1 952 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 ISPDA4D126 451 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 RFPL4AA6NLU0 287 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 FOXI3A8MTJ6 420 aaPredicted RBP4.35□□□□□ -1.71
SPG11-220ENST00000559933 VSTM5A8MXK1 200 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 SRRM5B3KS81 715 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 RFPL4AL1F8VTS6 287 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 TMEM178BH3BS89 294 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 H7C417 338 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 OVOL3O00110 214 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 SSX4O60224 188 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 OR7C1O76099 320 aaPredicted RBP4.35□□□□□ -1.71
SPG11-220ENST00000559933 OR2H2O95918 312 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 HAND1O96004 215 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 AMY2BP19961 511 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 GLRA1P23415 457 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 TNFSF8P32971 234 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 PTH2RP49190 550 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 TAS2R20P59543 309 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 FGF12P61328 243 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 SEC61A1P61619 476 aaKnown RBP4.35□□□□□ -1.71
SPG11-220ENST00000559933 ATXN7L3Q14CW9 347 aaPredicted RBP4.35□□□□□ -1.71
SPG11-220ENST00000559933 MOGQ16653 247 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 FAM209AQ5JX71 171 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 ATAD3CQ5T2N8 411 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 Q6P435 159 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 LYPD2Q6UXB3 125 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 ASCL4Q6XD76 172 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 C6orf201Q7Z4U5 140 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 CCDC190Q86UF4 302 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 MKXQ8IYA7 352 aa4.35□□□□□ -1.71
SPG11-220ENST00000559933 FAM58AQ8N1B3 248 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms