RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MEGF11A6BM72 1044 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 NKX6-3A6NJ46 265 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 IFITM5A6NNB3 132 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 TMEM14DPA8MWL7 114 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 K7N7A8 449 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 NDUFB3O43676 98 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 NDUFA2O43678 99 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 AIREO43918 545 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 GABARAPO95166 117 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 CYB5AP00167 134 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 TK1P04183 234 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 MGMTP16455 207 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 LMO1P25800 156 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 CFPP27918 469 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 HTR2CP28335 458 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 ERVFRD-1P60508 538 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 KCNJ8Q15842 424 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 TAF9Q16594 264 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 NHLRC3Q5JS37 347 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 SPIN3Q5JUX0 258 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 GLT8D1Q68CQ7 371 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 BRICD5Q6PL45 260 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 Q6ZPA2 131 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 NLRC3Q7RTR2 1065 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 Q8IYB0 196 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 OSR2Q8N2R0 312 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 LY6G5BQ8NDX9 201 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 OR51D1Q8NGF3 324 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 OR6M1Q8NGM8 313 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 PLPPR1Q8TBJ4 325 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 COQ2Q96H96 371 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 Q96M66 194 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 METTL9Q9H1A3 318 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 PPA2Q9H2U2 334 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 SEBOXQ9HB31 216 aaPredicted RBP8.99□□□□□ -0.97
TPM1-217ENST00000559108 VCX3AQ9NNX9 186 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 RPUSD1Q9UJJ7 312 aaKnown RBP8.99□□□□□ -0.97
TPM1-217ENST00000559108 SSR3Q9UNL2 185 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 V9GY05 133 aa8.99□□□□□ -0.97
TPM1-217ENST00000559108 KIAA2026Q5HYC2 2103 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 TRAV20A0A0B4J274 112 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 TMEM272A0A1B0GTI8 110 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 FOXI3A8MTJ6 420 aaPredicted RBP8.98□□□□□ -0.97
TPM1-217ENST00000559108 HSPB6O14558 160 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 FOXH1O75593 365 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 MMP9P14780 707 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 NDUFB7P17568 137 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 RAB3BP20337 219 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 RPS19P39019 145 aaKnown RBP8.98□□□□□ -0.97
TPM1-217ENST00000559108 VBP1P61758 197 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 PAX8Q06710 450 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 SCN1BQ07699 218 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 ZNF273Q14593 569 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 CR1LQ2VPA4 569 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 UTF1Q5T230 341 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 GPR107Q5VW38 600 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 SLC36A1Q7Z2H8 476 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 GLCCI1Q86VQ1 547 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 BPIFB2Q8N4F0 458 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 ZNF561Q8N587 486 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 C11orf42Q8N5U0 333 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 Q8N7P7 452 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 ASCC1Q8N9N2 400 aaKnown RBP8.98□□□□□ -0.97
TPM1-217ENST00000559108 PNLDC1Q8NA58 520 aaKnown RBP8.98□□□□□ -0.97
TPM1-217ENST00000559108 OR4M1Q8NGD0 313 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 DYRK2Q92630 601 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 CPNE2Q96FN4 548 aaPredicted RBP8.98□□□□□ -0.97
TPM1-217ENST00000559108 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 BARHL1Q9BZE3 327 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 SLITRK2Q9H156 845 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 LPAR5Q9H1C0 372 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 PLGRKTQ9HBL7 147 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 ST3GAL6Q9Y274 331 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 SOX21Q9Y651 276 aaPredicted RBP8.98□□□□□ -0.97
TPM1-217ENST00000559108 CUBNO60494 3623 aa8.98□□□□□ -0.97
TPM1-217ENST00000559108 LOC105371242A0A075B767 164 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 PPIAL4CA0A0B4J2A2 164 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 KIR2DS1A0A191URI9 304 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 A8MV72 311 aaPredicted RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 CRTAPO75718 401 aaPredicted RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 MPIG6BO95866 241 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 FSHBP01225 129 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 CHRM2P08172 466 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 ZNF44P15621 663 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 CCL3L1P16619 93 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 MYL9P24844 172 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 DLX6P56179 175 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 RPS27AP62979 156 aaKnown RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 IL13RA2Q14627 380 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 ATXN7L3Q14CW9 347 aaPredicted RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 RAB11BQ15907 218 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 C2orf76Q3KRA6 126 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 MOGAT2Q3SYC2 334 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 KLF17Q5JT82 389 aaPredicted RBP8.97□□□□□ -0.97
TPM1-217ENST00000559108 FAM120AOSQ5T036 256 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 SFXN4Q6P4A7 337 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 C5orf24Q7Z6I8 188 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 ANKRD13BQ86YJ7 626 aa8.97□□□□□ -0.97
TPM1-217ENST00000559108 OR8H2Q8N162 312 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms