RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 OR5D14Q8NGL3 314 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 TNFAIP8L1Q8WVP5 186 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 TNFRSF14Q92956 283 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 SPSB1Q96BD6 273 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 C10orf35Q96D05 121 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 PPA2Q9H2U2 334 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 VCXQ9H320 206 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 EXOSC4Q9NPD3 245 aaKnown RBP9.81□□□□□ -0.84
TPM1-216ENST00000558910 NOX4Q9NPH5 578 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 MRPS18AQ9NVS2 196 aaKnown RBP9.81□□□□□ -0.84
TPM1-216ENST00000558910 ING4Q9UNL4 249 aa9.81□□□□□ -0.84
TPM1-216ENST00000558910 CAB39Q9Y376 341 aaPredicted RBP9.81□□□□□ -0.84
TPM1-216ENST00000558910 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
TPM1-216ENST00000558910 MEGF11A6BM72 1044 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 PTGES3LE9PB15 166 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 MAGEB3O15480 346 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 SULT1B1O43704 296 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 PSPNO60542 156 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 FBP1P09467 338 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 RAB3AP20336 220 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 AQP4P55087 323 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 LGALS4P56470 323 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 BPIFB3P59826 476 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 SLC34A1Q06495 639 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 FOXL1Q12952 345 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 CDK5R1Q15078 307 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 KISS1Q15726 138 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 NCR3LG1Q68D85 454 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 RPL22L1Q6P5R6 122 aaKnown RBP9.8□□□□□ -0.84
TPM1-216ENST00000558910 C17orf107Q6ZR85 190 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 DNAAF1Q8NEP3 725 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 OR5D13Q8NGL4 314 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 GPR148Q8TDV2 347 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 SSMEM1Q8WWF3 244 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 JAM3Q9BX67 310 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 BABAM2Q9NXR7 383 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 GLS2Q9UI32 602 aa9.8□□□□□ -0.84
TPM1-216ENST00000558910 DIMT1Q9UNQ2 313 aaKnown RBP9.8□□□□□ -0.84
TPM1-216ENST00000558910 SF3B6Q9Y3B4 125 aaKnown RBP9.8□□□□□ -0.84
TPM1-216ENST00000558910 A0A1W2PPH5 198 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 IRGMA1A4Y4 181 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 BTBD17A6NE02 478 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 SH2D1BO14796 132 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 MYL12BO14950 172 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 GPR137BO60478 399 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 ZNF737O75373 536 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 CDRT1O95170 752 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 HTR3BO95264 441 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 OR2H2O95918 312 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 ARG1P05089 322 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 C21orf33P30042 268 aaPredicted RBP9.79□□□□□ -0.84
TPM1-216ENST00000558910 IER3P46695 156 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 OR3A4PP47883 348 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 UBE2E1P51965 193 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 MRPL28Q13084 256 aaKnown RBP9.79□□□□□ -0.84
TPM1-216ENST00000558910 MED21Q13503 144 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 ATXN7L3Q14CW9 347 aaPredicted RBP9.79□□□□□ -0.84
TPM1-216ENST00000558910 TAF9Q16594 264 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 LAIR2Q6ISS4 152 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 HCP5Q6MZN7 132 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 LHFPL4Q7Z7J7 247 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 Q8IYB0 196 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 NRG4Q8WWG1 115 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 SGCDQ92629 289 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 GHSRQ92847 366 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 TMEM106AQ96A25 262 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 SNX22Q96L94 193 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 SLITRK2Q9H156 845 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 DCLRE1BQ9H816 532 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 ZMAT3Q9HA38 289 aaKnown RBP9.79□□□□□ -0.84
TPM1-216ENST00000558910 HMG20AQ9NP66 347 aa9.79□□□□□ -0.84
TPM1-216ENST00000558910 EFCAB10A6NFE3 127 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 H0YHG0 523 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 H3BUX3 64 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 GABRPO00591 440 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 CASQ2O14958 399 aaPredicted RBP9.78□□□□□ -0.84
TPM1-216ENST00000558910 DEGS1O15121 323 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 CD2P06729 351 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 ZNF728P0DKX0 622 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 OR3A1P47881 315 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 RAB13P51153 203 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 RAG2P55895 527 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 PPP3R1P63098 170 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 AESQ08117 197 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 RSU1Q15404 277 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 DDI2Q5TDH0 399 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 PRAMEF5Q5TYX0 476 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 BAIAP2L2Q6UXY1 529 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 OR8H2Q8N162 312 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 ZNF714Q96N38 554 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 CITED4Q96RK1 184 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 FAM234AQ9H0X4 552 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 DPAGT1Q9H3H5 408 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 HEXA-AS1Q9H8Q6 139 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 C8orf4Q9NR00 106 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 C1RLQ9NZP8 487 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 ZNRD1Q9P1U0 126 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 ZNF281Q9Y2X9 895 aa9.78□□□□□ -0.84
TPM1-216ENST00000558910 PCDHGB5Q9Y5G0 923 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms