RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 K7N7A8 449 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 M0R1W7 72 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 RRP9O43818 475 aaKnown RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 FCN3O75636 299 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 OR2H2O95918 312 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 CD1AP06126 327 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 FSTP19883 344 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 PTGFRP43088 359 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 GABARAPL2P60520 117 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 ZP1P60852 638 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 RPS11P62280 158 aaKnown RBP eCLIP7.4□□□□□ -1.22
SPG11-207ENST00000558138 RPS25P62851 125 aaKnown RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 PRB3Q04118 309 aaPredicted RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 MLLT11Q13015 90 aaPredicted RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 KLRD1Q13241 179 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 GPR176Q14439 515 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 IRF3Q14653 427 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 ATXN7L3Q14CW9 347 aaPredicted RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 ZNF146Q15072 292 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 TRAM1Q15629 374 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 TBCEQ15813 527 aaPredicted RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 KRTAP21-3Q3LHN1 58 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 SLC22A6Q4U2R8 563 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 PAN3Q58A45 887 aaKnown RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 KLF17Q5JT82 389 aaPredicted RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 GLT8D1Q68CQ7 371 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 NCR3LG1Q68D85 454 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 GLIPR1L1Q6UWM5 242 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 BCL6BQ8N143 479 aaPredicted RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 OSR2Q8N2R0 312 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 TPRX1Q8N7U7 411 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 LY6G5BQ8NDX9 201 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 PXT1Q8NFP0 134 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 NEK7Q8TDX7 302 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 DUX5Q96PT3 197 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 TBX15Q96SF7 602 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 MGLLQ99685 303 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 SIRPDQ9H106 197 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 PPA2Q9H2U2 334 aa7.4□□□□□ -1.22
SPG11-207ENST00000558138 METTL8Q9H825 291 aaKnown RBP7.4□□□□□ -1.22
SPG11-207ENST00000558138 JMJD1CQ15652 2540 aa7.4□□□□□ -1.23
SPG11-207ENST00000558138 TRGV10A0A0A0MS01 117 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 TRBV5-7A0A0A0MS05 114 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 IGHV1-69DA0A0B4J2H0 117 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 CENPVL3A0A0U1RRI6 287 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 MDFIC2A0A1B0GVS7 189 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 MEGF11A6BM72 1044 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 MAGEA13PA6NCF6 341 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 BTBD17A6NE02 478 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 MGST3O14880 152 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 DENRO43583 198 aaKnown RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 ZNF780AO75290 641 aaPredicted RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 CRTAPO75718 401 aaPredicted RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 OR7C1O76099 320 aaPredicted RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 VENTXO95231 258 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 FSHBP01225 129 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 IGHV1-69P01742 117 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 MMP9P14780 707 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 CCL3L1P16619 93 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 IGFBP3P17936 291 aaPredicted RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 COX7A1P24310 79 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 PSMA1P25786 263 aaKnown RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 PSMB9P28065 219 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 DLX1P56177 255 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 LGALS4P56470 323 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 BPIFB3P59826 476 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 ERVFRD-1P60508 538 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 GPR50Q13585 617 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 ZNF273Q14593 569 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 INSL4Q14641 139 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 PIGYQ3MUY2 71 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 KRBOX4Q5JUW0 171 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 ATAD3CQ5T2N8 411 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 TMEM200BQ69YZ2 307 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 ZNF529Q6P280 563 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 ZNF782Q6ZMW2 699 aaPredicted RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 CHST4Q8NCG5 386 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 OR4S1Q8NGB4 309 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 C8orf46Q8TAG6 207 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 DACT3Q96B18 629 aaPredicted RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 PLGRKTQ9HBL7 147 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 ISYNA1Q9NPH2 558 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 ST3GAL6Q9Y274 331 aa7.39□□□□□ -1.23
SPG11-207ENST00000558138 LSM2Q9Y333 95 aaKnown RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 SF3B6Q9Y3B4 125 aaKnown RBP7.39□□□□□ -1.23
SPG11-207ENST00000558138 TMEM82A0PJX8 343 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 MEIOCA2RUB1 952 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 PSPNO60542 156 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 MRPS14O60783 128 aaKnown RBP7.38□□□□□ -1.23
SPG11-207ENST00000558138 ARL6IP5O75915 188 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 GTF2F2P13984 249 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 CPEP16870 476 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 MYL9P24844 172 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 CALRP27797 417 aaKnown RBP7.38□□□□□ -1.23
SPG11-207ENST00000558138 GLP1RP43220 463 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 OR3A1P47881 315 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 P2RX3P56373 397 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 HILS1P60008 231 aa7.38□□□□□ -1.23
SPG11-207ENST00000558138 AESQ08117 197 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms