RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 NOX3Q9HBY0 568 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 DDX19AQ9NUU7 478 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 OR12D3Q9UGF7 316 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 PSG11Q9UQ72 335 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 CSAG2Q9Y5P2 127 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 WSB1Q9Y6I7 421 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 CARMIL3Q8ND23 1372 aa2.68□□□□□ -1.98
TDP1-217ENST00000557782 CHD2O14647 1828 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 SETD1AO15047 1707 aaKnown RBP2.68□□□□□ -1.98
TDP1-217ENST00000557782 A0A1W2PP64 1363 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 TRAV8-3A0A0A6YYJ7 113 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 CCL15-CCL14A0A0B4J2E2 113 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 IGHV5-10-1A0A0J9YXX1 117 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 A0A0U1RQV1 116 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 E5RI56 91 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 TRAF3IP2O43734 574 aaPredicted RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 TNNC2P02585 160 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 IGHV1-8P0DP01 117 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 MYL12AP19105 171 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 ZBTB25P24278 435 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 IL3RAP26951 378 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 ELK4P28324 431 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 ADORA1P30542 326 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 TCL1AP56279 114 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 ERVS71-1P61550 626 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 PPP1CAP62136 330 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 DAZ2Q13117 558 aaKnown RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 PPP1R1AQ13522 171 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 ZNF235Q14590 738 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 PAFAH1B3Q15102 231 aaKnown RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 SNCBQ16143 134 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 SNRNP35Q16560 246 aaKnown RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 CCL15Q16663 113 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 SPIN3Q5JUX0 258 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 CLLU1OSQ5K130 101 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 ZNF544Q6NX49 715 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 GUSBP11Q6P575 273 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 GALNT10Q86SR1 603 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 OR2M7Q8NG81 312 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 OR1L1Q8NH94 360 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 C15orf40Q8WUR7 153 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 SRSF12Q8WXF0 261 aaKnown RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 TMEM158Q8WZ71 300 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 FAM210BQ96KR6 192 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 IMMP1LQ96LU5 166 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 PRAP1Q96NZ9 151 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 ANAPC13Q9BS18 74 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 EBPLQ9BY08 206 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 MROQ9BYG7 248 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 CENPHQ9H3R5 247 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 VSIRQ9H7M9 311 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 PARP11Q9NR21 331 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 DAZ3Q9NR90 486 aaKnown RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 STOML2Q9UJZ1 356 aa2.67□□□□□ -1.98
TDP1-217ENST00000557782 LSM5Q9Y4Y9 91 aaKnown RBP2.67□□□□□ -1.98
TDP1-217ENST00000557782 LRP4O75096 1905 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 ARHGAP23Q9P227 1491 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 MYBPHLA2RUH7 354 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 NKX2-6A6NCS4 301 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 A6NDX4 124 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 ARL6IP5O75915 188 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 CA2P00918 260 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 IGHV3-11P01762 117 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 ZNF688P0C7X2 276 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 LINC00614P0C842 121 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 ZNF17P17021 662 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 SULT1A1P50225 295 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 SULT1A2P50226 295 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 SERPINB9P50453 376 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 CRISP3P54108 245 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 DYNLL1P63167 89 aaKnown RBP2.66□□□□□ -1.98
TDP1-217ENST00000557782 FMODQ06828 376 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 C1DQ13901 141 aaKnown RBP2.66□□□□□ -1.98
TDP1-217ENST00000557782 FCN2Q15485 313 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 IL17AQ16552 155 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 SMUG1Q53HV7 270 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 FAM78AQ5JUQ0 283 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 FBXL22Q6P050 247 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 RASSF6Q6ZTQ3 369 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 CCDC121Q6ZUS5 278 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 OLIG3Q7RTU3 272 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 NT5DC3Q86UY8 548 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 COMMD7Q86VX2 200 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 PCP2Q8IVA1 136 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 RIMKLAQ8IXN7 391 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 LINC00337Q8N6G1 96 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 ZNF645Q8N7E2 425 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 Q8N9W7 124 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 OR1M1Q8NGA1 313 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 SLC37A2Q8TED4 501 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 FAM222BQ8WU58 562 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 TWIST2Q8WVJ9 160 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 IMP4Q96G21 291 aaKnown RBP2.66□□□□□ -1.98
TDP1-217ENST00000557782 YPEL4Q96NS1 127 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 OR2A5Q96R48 311 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 ZNF382Q96SR6 550 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 EBNA1BP2Q99848 306 aaKnown RBP2.66□□□□□ -1.98
TDP1-217ENST00000557782 ZNF649Q9BS31 505 aa2.66□□□□□ -1.98
TDP1-217ENST00000557782 TIPINQ9BVW5 301 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms