RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ZDHHC23Q8IYP9 409 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 CNEP1R1Q8N9A8 125 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 RELL2Q8NC24 303 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-229ENST00000557348 OR5AP2Q8NGF4 316 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 OR1S2Q8NGQ3 325 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 PIGCQ92535 297 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 OCSTAMPQ9BR26 566 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 UQCC1Q9NVA1 299 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 HSF4Q9ULV5 492 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 PROCRQ9UNN8 238 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 MPC1Q9Y5U8 109 aa10.91□□□□□ -0.66
SHMT2-229ENST00000557348 FAM230AA0A1W2PPH8 454 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A10PA6NDY2 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A18PA6NE21 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A16PA6NEW6 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A20PA6NIJ5 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A8PA6NJQ4 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A7PA6NKC0 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 ANKRD30BLA7E2S9 258 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A22PA8MWA6 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A12PA8MX19 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A5PA8MXJ8 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A23PA8MXZ1 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 MT-ND4LP03901 98 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 AMY2AP04746 511 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 CRYBA1P05813 215 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A15PP0C7V4 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A13PP0C7W8 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A14PP0C7W9 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 FAM90A24PP0C7X0 464 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 LYL1P12980 280 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 GNB3P16520 340 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 SELEP16581 610 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 IGHV1-2P23083 117 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 KIR2DL2P43627 348 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-229ENST00000557348 TAS2R46P59540 309 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 C2orf68Q2NKX9 166 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 CEACAM21Q3KPI0 293 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 CRIP3Q6Q6R5 217 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 ZNF600Q6ZNG1 722 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 BEND4Q6ZU67 534 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 ARRDC1Q8N5I2 433 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 OR56B2PQ8NGI1 322 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 OR5D18Q8NGL1 313 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 MALSU1Q96EH3 234 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 Q96M66 194 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 SCNM1Q9BWG6 230 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 PAPOLGQ9BWT3 736 aaKnown RBP10.9□□□□□ -0.66
SHMT2-229ENST00000557348 POFUT1Q9H488 388 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 BANF2Q9H503 90 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 CDH20Q9HBT6 801 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 DNAJB11Q9UBS4 358 aa10.9□□□□□ -0.66
SHMT2-229ENST00000557348 NCOR2Q9Y618 2525 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 A0A0A6YYD4 124 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 OR5B21A6NL26 309 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 FOXI3A8MTJ6 420 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 GPR31O00270 319 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 IFNA6P05013 189 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 PET100P0DJ07 73 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 SPP1P10451 314 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 CBR1P16152 277 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 CAV2P51636 162 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 DHRS2Q13268 280 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ARFRP1Q13795 201 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 GABRA6Q16445 453 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 TMEM200AQ86VY9 491 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 SPACA3Q8IXA5 215 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 GCNT2Q8N0V5 402 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 BPIFB2Q8N4F0 458 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 RBMXL3Q8N7X1 1067 aaKnown RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 FAM169BQ8N8A8 192 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 C9orf106Q8NAJ2 232 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 OR5A2Q8NGI9 324 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 OR8S1Q8NH09 359 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 SCGB3A2Q96PL1 93 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 NICN1Q9BSH3 213 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ZMAT3Q9HA38 289 aaKnown RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 RHOFQ9HBH0 211 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 AMDHD2Q9Y303 409 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 KPTNQ9Y664 436 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF407Q9C0G0 2248 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 MEX3AA1L020 520 aaKnown RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 MEIS3P1A6NDR6 274 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF503-AS2A6NEH8 195 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 K7ENP7 123 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 SOCS1O15524 211 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 SSX5O60225 188 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 RAD51DO75771 328 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 EIF3GO75821 320 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 HTR3BO95264 441 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 DUS4LO95620 317 aaKnown RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ACAA1P09110 424 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ZNF14P17017 642 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-229ENST00000557348 ZBTB25P24278 435 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 TIMP3P35625 211 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 PRDX4Q13162 271 aa10.89□□□□□ -0.67
SHMT2-229ENST00000557348 VAX1Q5SQQ9 334 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms