RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CDH26Q8IXH8 852 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 Q8N7P7 452 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 CHST4Q8NCG5 386 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 OR4M1Q8NGD0 313 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 SGCDQ92629 289 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 UFD1Q92890 307 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 DERL3Q96Q80 235 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 METTL9Q9H1A3 318 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 UNKLQ9H9P5 680 aaKnown RBP10.26□□□□□ -0.77
SLIRP-209ENST00000557342 SIRT7Q9NRC8 400 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 IL36RNQ9UBH0 155 aa10.26□□□□□ -0.77
SLIRP-209ENST00000557342 A0A1W2PPK0 400 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 hADV38S2A0JD32 116 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 TMEM82A0PJX8 343 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 FUOMA2VDF0 154 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 MGST3O14880 152 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 OR2H2O95918 312 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 CSTBP04080 98 aaKnown RBP10.25□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF44P15621 663 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 LMO1P25800 156 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 DUSP1P28562 367 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 BAMBIQ13145 260 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 IL13RA2Q14627 380 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 TRAM1Q15629 374 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 ASCL4Q6XD76 172 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 C17orf107Q6ZR85 190 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 NKAIN3Q8N8D7 197 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 SPATA3Q8NHX4 192 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 FAM216AQ8WUB2 273 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 ORAI1Q96D31 301 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF48Q96MX3 618 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-209ENST00000557342 NR1H4Q96RI1 486 aaPredicted RBP10.25□□□□□ -0.77
SLIRP-209ENST00000557342 C19orf24Q9BVV8 132 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 PRDM13Q9H4Q3 707 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 NOX4Q9NPH5 578 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 IL36GQ9NZH8 169 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 ING4Q9UNL4 249 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 MXRA5Q9NR99 2828 aa10.25□□□□□ -0.77
SLIRP-209ENST00000557342 TRAV8-7A0A075B6U6 113 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 MEGF11A6BM72 1044 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 RNASEK-C17orf49H0YIS7 233 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 SIRPB1O00241 398 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 DEGS1O15121 323 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 PSPNO60542 156 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 MRPS14O60783 128 aaKnown RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF780AO75290 641 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 HTR3BO95264 441 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 MAS1P04201 325 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 HSMCR30P0CW71 290 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 PSMA1P25786 263 aaKnown RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 ERP29P30040 261 aaKnown RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 OR3A4PP47883 348 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 UBE2E1P51965 193 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 ERVFRD-1P60508 538 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 GABARAPL2P60520 117 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 UBA52P62987 128 aaKnown RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 MLLT11Q13015 90 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 TPBGQ13641 420 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 GPR176Q14439 515 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 EDDM3AQ14507 147 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 TBCEQ15813 527 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 DEFB112Q30KQ8 113 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 ACSM3Q53FZ2 586 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 UNQ9370/PRO34162Q6UXP9 181 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 PHC2Q8IXK0 858 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 ZDHHC22Q8N966 263 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 Q8NFD4 153 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 OR4S1Q8NGB4 309 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 OR51T1Q8NGJ9 327 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 TNFRSF14Q92956 283 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 TMED9Q9BVK6 235 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 YTHDF1Q9BYJ9 559 aaKnown RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 CHST6Q9GZX3 395 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 HEXA-AS1Q9H8Q6 139 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 TCF7L1Q9HCS4 588 aa10.24□□□□□ -0.77
SLIRP-209ENST00000557342 SF3B6Q9Y3B4 125 aaKnown RBP10.24□□□□□ -0.77
SLIRP-209ENST00000557342 A0A0G2JK05 382 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 DNAJC9-AS1A6NH13 148 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 CLDN34H7C241 214 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 PIN1P1O15428 100 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 CDRT1O95170 752 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 RBP4P02753 201 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 CSN2P05814 226 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 CPEP16870 476 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 OR3A1P47881 315 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 SCN1BQ07699 218 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF273Q14593 569 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 LIPKQ5VXJ0 399 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 Q6P435 159 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 Q6YL49 198 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 ZNF367Q7RTV3 350 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 LINC00596Q86U02 117 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 PDZD9Q8IXQ8 264 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 JAGN1Q8N5M9 183 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 PHYHIPQ92561 330 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 MGLLQ99685 303 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
SLIRP-209ENST00000557342 FAM96BQ9Y3D0 163 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms