RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 Q6ZSV7 163 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 ZFP41Q8N8Y5 198 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 OR51A2Q8NGJ7 313 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 OR5R1Q8NH85 324 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 AJUBAQ96IF1 538 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 GPER1Q99527 375 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 SLITRK2Q9H156 845 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 PCDHGB5Q9Y5G0 923 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 KIAA2026Q5HYC2 2103 aa13.45□□□□□ -0.26
VSX1-207ENST00000557285 TRRAPQ9Y4A5 3859 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 IRGMA1A4Y4 181 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 HSPB6O14558 160 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 MGST3O14880 152 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 MAGEB3O15480 346 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 KDM4BO94953 1096 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 GNAO1P09471 354 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 IGHV1-8P0DP01 117 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 RAB3AP20336 220 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 ADARB1P78563 741 aaKnown RBP13.44□□□□□ -0.26
VSX1-207ENST00000557285 CDK5R1Q15078 307 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 CRIP3Q6Q6R5 217 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 PARP16Q8N5Y8 322 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 PACRGLQ8N7B6 248 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 OR13C5Q8NGS8 318 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 OR13D1Q8NGV5 346 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 LINC01006Q8NI28 216 aa13.44□□□□□ -0.26
VSX1-207ENST00000557285 CHCHD3Q9NX63 227 aaKnown RBP13.44□□□□□ -0.26
VSX1-207ENST00000557285 EXOSC1Q9Y3B2 195 aaKnown RBP13.44□□□□□ -0.26
VSX1-207ENST00000557285 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
VSX1-207ENST00000557285 PNMA8CA0A1B0GUJ8 204 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 FAM172BPA6NC97 362 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 CAPGP40121 348 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 ZP1P60852 638 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 MEF2CQ06413 473 aaPredicted RBP13.43□□□□□ -0.26
VSX1-207ENST00000557285 AESQ08117 197 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 ATXN7L3Q14CW9 347 aaPredicted RBP13.43□□□□□ -0.26
VSX1-207ENST00000557285 FAM189A2Q15884 450 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 RPL22L1Q6P5R6 122 aaKnown RBP13.43□□□□□ -0.26
VSX1-207ENST00000557285 OR10K1Q8NGX5 313 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 PPP1R35Q8TAP8 253 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 HAVCR2Q8TDQ0 301 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 GPR148Q8TDV2 347 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 TNFAIP8L1Q8WVP5 186 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 ORAI1Q96D31 301 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 TMEM80Q96HE8 168 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 JAM3Q9BX67 310 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 C8orf4Q9NR00 106 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 DIMT1Q9UNQ2 313 aaKnown RBP13.43□□□□□ -0.26
VSX1-207ENST00000557285 LINC00312Q9Y6C7 94 aa13.43□□□□□ -0.26
VSX1-207ENST00000557285 GABRPO00591 440 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 DEGS1O15121 323 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 XPNPEP2O43895 674 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 LALBAP00709 142 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 CD2P06729 351 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 TGFBR2P37173 567 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 GLIPR1P48060 266 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 RAB13P51153 203 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 P2RX3P56373 397 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 KRTAP10-3P60369 221 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 MED21Q13503 144 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 SSX2Q16385 188 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 PRR31Q5SQ13 230 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 OGFRL1Q5TC84 451 aaPredicted RBP13.42□□□□□ -0.26
VSX1-207ENST00000557285 PRAMEF5Q5TYX0 476 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 ASPHD2Q6ICH7 369 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 SAXO1Q8IYX7 474 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 C8orf59Q8N0T1 100 aaPredicted RBP13.42□□□□□ -0.26
VSX1-207ENST00000557285 DYNAPQ8N1N2 210 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 GGHQ92820 318 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 TMEM106AQ96A25 262 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 BABAM2Q9NXR7 383 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 SESN1Q9Y6P5 492 aa13.42□□□□□ -0.26
VSX1-207ENST00000557285 A0A0G2JK05 382 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 MMP23AO75900 390 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 CLPXO76031 633 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 RBP4P02753 201 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 JUNBP17275 347 aaPredicted RBP13.41□□□□□ -0.26
VSX1-207ENST00000557285 OR3A4PP47883 348 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 PPP3R1P63098 170 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 ST3GAL4Q11206 333 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 RSU1Q15404 277 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 CCDC58Q4VC31 144 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 BAIAP2L2Q6UXY1 529 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 NDNFQ8TB73 568 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 SMIM19Q96E16 107 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 MEGF9Q9H1U4 602 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 SEBOXQ9HB31 216 aaPredicted RBP13.41□□□□□ -0.26
VSX1-207ENST00000557285 SIGLEC9Q9Y336 463 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 HILPDAQ9Y5L2 63 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 PKD1L1Q8TDX9 2849 aa13.41□□□□□ -0.26
VSX1-207ENST00000557285 MGAM2Q2M2H8 2515 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 TRGV10A0A0A0MS01 117 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 ODF3BA8MYP8 253 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 H0YJX3 145 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 SLC33A1O00400 549 aaPredicted RBP13.4□□□□□ -0.26
VSX1-207ENST00000557285 ALX3O95076 343 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 GABRA5P31644 462 aa13.4□□□□□ -0.26
VSX1-207ENST00000557285 PIGYQ3MUY2 71 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms