RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 BMXP51813 675 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 BAMBIQ13145 260 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 ELP2Q6IA86 826 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 ASCL4Q6XD76 172 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 GDPD3Q7L5L3 318 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 DERL3Q96Q80 235 aa18.74■□□□□ 0.59
TDP1-216ENST00000556867 TRAV8-7A0A075B6U6 113 aa18.73■□□□□ 0.59
TDP1-216ENST00000556867 GABRR1P24046 479 aa18.73■□□□□ 0.59
TDP1-216ENST00000556867 ZNF93P35789 620 aaPredicted RBP18.73■□□□□ 0.59
TDP1-216ENST00000556867 DLX1P56177 255 aa18.73■□□□□ 0.59
TDP1-216ENST00000556867 ZNF273Q14593 569 aa18.73■□□□□ 0.59
TDP1-216ENST00000556867 RBM48Q5RL73 367 aaKnown RBP18.73■□□□□ 0.59
TDP1-216ENST00000556867 PDZD9Q8IXQ8 264 aa18.73■□□□□ 0.59
TDP1-216ENST00000556867 CLDN34H7C241 214 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 OR2H2O95918 312 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 LMO1P25800 156 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 MAPK3P27361 379 aaPredicted RBP18.72■□□□□ 0.59
TDP1-216ENST00000556867 PTGFRP43088 359 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 OR3A1P47881 315 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 OR3A4PP47883 348 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 EDDM3BP56851 147 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 KLRD1Q13241 179 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 MED22Q15528 200 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 GRK1Q15835 563 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 PRSS48Q7RTY5 328 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 PIP4P2Q8N4L2 257 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 C11orf42Q8N5U0 333 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 Q8NFD4 153 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 OR4S1Q8NGB4 309 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 PPP1R35Q8TAP8 253 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 ZNF184Q99676 751 aaPredicted RBP18.72■□□□□ 0.59
TDP1-216ENST00000556867 FAM192AQ9GZU8 254 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 CHST6Q9GZX3 395 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 NOX4Q9NPH5 578 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 BLOC1S6Q9UL45 172 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 FOXJ3Q9UPW0 622 aa18.72■□□□□ 0.59
TDP1-216ENST00000556867 RRP15Q9Y3B9 282 aaKnown RBP18.72■□□□□ 0.59
TDP1-216ENST00000556867 MAGEA13PA6NCF6 341 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 SIRPB1O00241 398 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 MGST3O14880 152 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 PIN1P1O15428 100 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 CCL3L1P16619 93 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 TGFBR2P37173 567 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 DLX6P56179 175 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 PRB3Q04118 309 aaPredicted RBP18.71■□□□□ 0.59
TDP1-216ENST00000556867 MEF2CQ06413 473 aaPredicted RBP18.71■□□□□ 0.59
TDP1-216ENST00000556867 GPR50Q13585 617 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 EDDM3AQ14507 147 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 Q6P435 159 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 MS4A15Q8N5U1 240 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 CHST4Q8NCG5 386 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 ZDHHC16Q969W1 377 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 NKX3-1Q99801 234 aaPredicted RBP18.71■□□□□ 0.59
TDP1-216ENST00000556867 IL36GQ9NZH8 169 aa18.71■□□□□ 0.59
TDP1-216ENST00000556867 hCG_1809904A0A1W2PP81 198 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 A0A1W2PPE2 198 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 A0A1W2PPK0 400 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 A0A1W2PR64 198 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 A0A1W2PRV1 198 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 EEF1B2P24534 225 aaKnown RBP18.7■□□□□ 0.58
TDP1-216ENST00000556867 ERP29P30040 261 aaKnown RBP18.7■□□□□ 0.58
TDP1-216ENST00000556867 UBE2E1P51965 193 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 RSU1Q15404 277 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 SLC9A3R2Q15599 337 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 HCP5Q6MZN7 132 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 Q6YL49 198 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 TCF23Q7RTU1 214 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 OR51T1Q8NGJ9 327 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 DUX5Q96PT3 197 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 CCDC90BQ9GZT6 254 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 ISYNA1Q9NPH2 558 aa18.7■□□□□ 0.58
TDP1-216ENST00000556867 A0A0U1RQK1 487 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 C17orf98A8MV24 154 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 NPFFO15130 113 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 RBP4P02753 201 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 RNASE1P07998 156 aaKnown RBP18.69■□□□□ 0.58
TDP1-216ENST00000556867 ZNF44P15621 663 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 P2RX3P56373 397 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 IL13RA2Q14627 380 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 UNQ9370/PRO34162Q6UXP9 181 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 CDH26Q8IXH8 852 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 UFD1Q92890 307 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 METTL9Q9H1A3 318 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 Q9H521 79 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 LINC00312Q9Y6C7 94 aa18.69■□□□□ 0.58
TDP1-216ENST00000556867 A0A0G2JK05 382 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 hADV38S2A0JD32 116 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 SLC33A1O00400 549 aaPredicted RBP18.68■□□□□ 0.58
TDP1-216ENST00000556867 HOXA3O43365 443 aaPredicted RBP18.68■□□□□ 0.58
TDP1-216ENST00000556867 CDRT1O95170 752 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 CSN2P05814 226 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 MELTFP08582 738 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 ZNF728P0DKX0 622 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 ERVFRD-1P60508 538 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 SCN1BQ07699 218 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 TPBGQ13641 420 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 ACSM3Q53FZ2 586 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 OR10K1Q8NGX5 313 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 SLC25A28Q96A46 364 aa18.68■□□□□ 0.58
TDP1-216ENST00000556867 TMED9Q9BVK6 235 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms