RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 RBMXP38159 391 aaKnown RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 ECI1P42126 302 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 KIR2DL2P43627 348 aaPredicted RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 TMEM211Q6ICI0 200 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 FAM214BQ7L5A3 538 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 TMEM200AQ86VY9 491 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 FOXRED2Q8IWF2 684 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 SGPP2Q8IWX5 399 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 RBPMSQ93062 196 aaKnown RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 HIST1H2AAQ96QV6 131 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 OR2J1Q9GZK6 312 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 OPA3Q9H6K4 179 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 NAA60Q9H7X0 242 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 PCDHB16Q9NRJ7 776 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 DLL3Q9NYJ7 618 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 RCC2Q9P258 522 aaKnown RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 KCNMB2Q9Y691 235 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 SPENQ96T58 3664 aaKnown RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 F5H0A9 414 aaPredicted RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 SCTP09683 121 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 LYL1P12980 280 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 UBE2NP61088 152 aaKnown RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 PPP1CBP62140 327 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 TMEM187Q14656 261 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 HERPUD1Q15011 391 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 GABRA6Q16445 453 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 GGNBP1Q5YKI7 109 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 PRSS54Q6PEW0 395 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 IGF2-ASQ6U949 168 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 DPPA2Q7Z7J5 298 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 MKXQ8IYA7 352 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 INO80EQ8NBZ0 244 aaPredicted RBP8.64□□□□□ -1.03
TMEM260-211ENST00000556648 LINC00052Q96N35 136 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 ARPC5LQ9BPX5 153 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 SLX1AQ9BQ83 275 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 OR51I2Q9H344 312 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 Q9N2K0 584 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 SLC2A9Q9NRM0 540 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 C1orf123Q9NWV4 160 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 RASL12Q9NYN1 266 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 LHX6Q9UPM6 363 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 IGKV1-6A0A0C4DH72 117 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A10PA6NDY2 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A18PA6NE21 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A16PA6NEW6 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A20PA6NIJ5 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A8PA6NJQ4 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A7PA6NKC0 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF891A8MT65 544 aaPredicted RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A22PA8MWA6 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A12PA8MX19 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A5PA8MXJ8 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A23PA8MXZ1 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 LGALS8O00214 317 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 HS3ST1O14792 307 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 CEACAM4O75871 244 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 NAPSAO96009 420 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A15PP0C7V4 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A13PP0C7W8 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A14PP0C7W9 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 FAM90A24PP0C7X0 464 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 SELEP16581 610 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 MPV17P39210 176 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 PMELP40967 661 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 GNG3P63215 75 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 CYCSP99999 105 aaKnown RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 HOXA4Q00056 320 aaPredicted RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 IAH1Q2TAA2 248 aaPredicted RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 ACSF3Q4G176 576 aaPredicted RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 ABCA11PQ4W5N1 156 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 C20orf204Q6ZNR8 217 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 SUMF2Q8NBJ7 301 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 OR5T2Q8NGG2 359 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 ANGPTL6Q8NI99 470 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 LHFPL5Q8TAF8 219 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 SLC25A40Q8TBP6 338 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 NEK7Q8TDX7 302 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 RTN4IP1Q8WWV3 396 aaPredicted RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 RDH5Q92781 318 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 GPHA2Q96T91 129 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 CDH20Q9HBT6 801 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 CYTL1Q9NRR1 136 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 MPC1Q9Y5U8 109 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 ZFHX4Q86UP3 3567 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 URB1O60287 2271 aaKnown RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 TRAV24A0A0B4J272 114 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 OR5B21A6NL26 309 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 PRR33A8MZF0 331 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 H0YL77 283 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 BET1O15155 118 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 PPYP01298 95 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 Q6ZT83 130 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 PDZD9Q8IXQ8 264 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 WDR31Q8NA23 367 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 LRRC20Q8TCA0 184 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
TMEM260-211ENST00000556648 PIK3IP1Q96FE7 263 aa8.63□□□□□ -1.03
TMEM260-211ENST00000556648 RSRP1Q9BUV0 290 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms