RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 ATP1B3P54709 279 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 EDDM3BP56851 147 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 ACTC1P68032 377 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 ACTA1P68133 377 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 TAF9Q16594 264 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 SMN1Q16637 294 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CNPY1Q3B7I2 92 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 TMEM244Q5VVB8 128 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 FOXB2Q5VYV0 432 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 Q6ZSR3 168 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 AHSA2Q719I0 299 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 GDPD3Q7L5L3 318 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 SSX6Q7RTT6 188 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CATSPERDQ86XM0 798 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 ANGPTL5Q86XS5 388 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CALHM1Q8IU99 346 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 MKXQ8IYA7 352 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 BATF2Q8N1L9 274 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 PNKDQ8N490 385 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CD177Q8N6Q3 437 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 ZSCAN4Q8NAM6 433 aaPredicted RBP6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 BEND2Q8NDZ0 799 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 OR4M1Q8NGD0 313 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 RORBQ92753 470 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 UBE2FQ969M7 185 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CEP19Q96LK0 163 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 SSX3Q99909 188 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CITED1Q99966 193 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 NRIP2Q9BQI9 281 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 RBM38Q9H0Z9 239 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 PPA2Q9H2U2 334 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 NEK6Q9HC98 313 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 TCF7L1Q9HCS4 588 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 RAB18Q9NP72 206 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 C19orf12Q9NSK7 152 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 FKBP14Q9NWM8 211 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 PAK1IP1Q9NWT1 392 aaPredicted RBP6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 GFOD1Q9NXC2 390 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CNOT2Q9NZN8 540 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 RSL24D1Q9UHA3 163 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 PFDN2Q9UHV9 154 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 RPL36Q9Y3U8 105 aaKnown RBP6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 CEPT1Q9Y6K0 416 aa6.28□□□□□ -1.4
HNRNPC-226ENST00000556628 LOC107986453A0A1B0GWG9 222 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 H3BUX3 64 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 TSPAN9O75954 239 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 CLPXO76031 633 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 INMTO95050 263 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 CDK1P06493 297 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 HTR1AP08908 422 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 PRKACBP22694 351 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 RBP2P50120 134 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 TMBIM6P55061 237 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 ERVK11-1P61568 191 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 COL10A1Q03692 680 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 EMX1Q04741 257 aaPredicted RBP6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 SRSF4Q08170 494 aaKnown RBP6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 UBE2V2Q15819 145 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 LY6EQ16553 131 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 LRRC75BQ2VPJ9 315 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 TP53I3Q53FA7 332 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 TMEM200BQ69YZ2 307 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 XAF1Q6GPH4 301 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 Q6ZSV7 163 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 EGFL6Q8IUX8 553 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 Q8IYB0 196 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 LILRB2Q8N423 598 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 STX19Q8N4C7 294 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 OR13F1Q8NGS4 319 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 OR13D1Q8NGV5 346 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 EMG1Q92979 244 aaKnown RBP6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 MUL1Q969V5 352 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 SLAMF9Q96A28 289 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 SNX22Q96L94 193 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 TSC22D3Q99576 134 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 CHST5Q9GZS9 411 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 MEGF9Q9H1U4 602 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 HES4Q9HCC6 221 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 PTTG2Q9NZH5 202 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 AASSQ9UDR5 926 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 GLS2Q9UI32 602 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 TENM1Q9UKZ4 2725 aa6.27□□□□□ -1.41
HNRNPC-226ENST00000556628 DBX1A6NMT0 343 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 H3BUI4 141 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 K7N7A8 449 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 MT-ND2P03891 347 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 CCL3L1P16619 93 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 GABRR1P24046 479 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 COX7A1P24310 79 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 DCKP27707 260 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 GABRA5P31644 462 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 POU3F4P49335 361 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 BMXP51813 675 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 PROK1P58294 105 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 ACTA2P62736 377 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 ACTG2P63267 376 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF85Q03923 595 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 ST3GAL4Q11206 333 aa6.26□□□□□ -1.41
HNRNPC-226ENST00000556628 ZNF273Q14593 569 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms