RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 MED21Q13503 144 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 GRK1Q15835 563 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 ZNF782Q6ZMW2 699 aaPredicted RBP16.72■□□□□ 0.27
VTI1B-205ENST00000555543 TBC1D15Q8TC07 691 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 GHSRQ92847 366 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 AJUBAQ96IF1 538 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 PGLYRP3Q96LB9 341 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 ZNF281Q9Y2X9 895 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 C17orf98A8MV24 154 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 GABRPO00591 440 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 OR2H2O95918 312 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 CD2P06729 351 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 TMEM225BP0DP42 221 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 OMGP23515 440 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 BMXP51813 675 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 RPS11P62280 158 aaKnown RBP eCLIP16.71■□□□□ 0.27
VTI1B-205ENST00000555543 TAF9Q16594 264 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 STX19Q8N4C7 294 aa16.71■□□□□ 0.27
VTI1B-205ENST00000555543 ZSCAN4Q8NAM6 433 aaPredicted RBP16.71■□□□□ 0.27
VTI1B-205ENST00000555543 EXOSC4Q9NPD3 245 aaKnown RBP16.71■□□□□ 0.27
VTI1B-205ENST00000555543 SF3B6Q9Y3B4 125 aaKnown RBP16.71■□□□□ 0.27
VTI1B-205ENST00000555543 NBEAL1Q6ZS30 2694 aa16.7■□□□□ 0.26
VTI1B-205ENST00000555543 TRBV5-5A0A0J9YX44 114 aa16.7■□□□□ 0.26
VTI1B-205ENST00000555543 PNMA8CA0A1B0GUJ8 204 aa16.7■□□□□ 0.26
VTI1B-205ENST00000555543 ZNF728P0DKX0 622 aa16.7■□□□□ 0.26
VTI1B-205ENST00000555543 MDKP21741 143 aaPredicted RBP16.7■□□□□ 0.26
VTI1B-205ENST00000555543 COX7A1P24310 79 aa16.7■□□□□ 0.26
VTI1B-205ENST00000555543 RELBQ01201 579 aa16.7■□□□□ 0.26
VTI1B-205ENST00000555543 SH2D1BO14796 132 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 MGST3O14880 152 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 GPR137BO60478 399 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 PAHP00439 452 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 PAX6P26367 422 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 MIDNQ504T8 468 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 Q6P435 159 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 SATL1Q86VE3 508 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 TNFAIP8L1Q8WVP5 186 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 SGCDQ92629 289 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 GPER1Q99527 375 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 HEXA-AS1Q9H8Q6 139 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 RHOFQ9HBH0 211 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 C1RLQ9NZP8 487 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 GLS2Q9UI32 602 aa16.69■□□□□ 0.26
VTI1B-205ENST00000555543 hCG_1809904A0A1W2PP81 198 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 A0A1W2PPE2 198 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 A0A1W2PR64 198 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 A0A1W2PRV1 198 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 MAGEA13PA6NCF6 341 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 H0YJX3 145 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 MYL12BO14950 172 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 MAGEB3O15480 346 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 OR3A4PP47883 348 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 P2RX3P56373 397 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 WNT4P56705 351 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 MEF2CQ06413 473 aaPredicted RBP16.68■□□□□ 0.26
VTI1B-205ENST00000555543 SCN1BQ07699 218 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 C6orf141Q5SZD1 244 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 PXT1Q8NFP0 134 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 OR10K1Q8NGX5 313 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 DYRK2Q92630 601 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 ZNF714Q96N38 554 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 PPA2Q9H2U2 334 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 DPAGT1Q9H3H5 408 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 PAK1IP1Q9NWT1 392 aaPredicted RBP16.68■□□□□ 0.26
VTI1B-205ENST00000555543 LINC00312Q9Y6C7 94 aa16.68■□□□□ 0.26
VTI1B-205ENST00000555543 TRAV8-7A0A075B6U6 113 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 A0A0G2JK05 382 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 hADV38S2A0JD32 116 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 RBP4P02753 201 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 IGHV1-8P0DP01 117 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 ZNF44P15621 663 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 IGFBP3P17936 291 aaPredicted RBP16.67■□□□□ 0.26
VTI1B-205ENST00000555543 LMO1P25800 156 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 TAS2R43P59537 309 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 PPP3R1P63098 170 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 Q499Y3 187 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 YIF1BQ5BJH7 314 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 DDI2Q5TDH0 399 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 ELP2Q6IA86 826 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 NANOGP1Q8N7R0 232 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 BEND2Q8NDZ0 799 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 CPNE2Q96FN4 548 aaPredicted RBP16.67■□□□□ 0.26
VTI1B-205ENST00000555543 OR14A2Q96R54 314 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 ZNF747Q9BV97 191 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 FAM192AQ9GZU8 254 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 TMEM138Q9NPI0 162 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 PCDHGB5Q9Y5G0 923 aa16.67■□□□□ 0.26
VTI1B-205ENST00000555543 TRBV5-7A0A0A0MS05 114 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 SLC33A1O00400 549 aaPredicted RBP16.66■□□□□ 0.26
VTI1B-205ENST00000555543 ALDOBP05062 364 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 CDK1P06493 297 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 ERP29P30040 261 aaKnown RBP16.66■□□□□ 0.26
VTI1B-205ENST00000555543 MTNR1BP49286 362 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 RAG2P55895 527 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 LHFPL4Q7Z7J7 247 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 PPP1R35Q8TAP8 253 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 VPREB3Q9UKI3 123 aa16.66■□□□□ 0.26
VTI1B-205ENST00000555543 ODF3BA8MYP8 253 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 CDRT1O95170 752 aa16.65■□□□□ 0.26
VTI1B-205ENST00000555543 NDUFA7O95182 113 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms