RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 HES1Q14469 280 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 ATP6V1FQ16864 119 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 HIKESHIQ53FT3 197 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 PYCR3Q53H96 274 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 DUPD1Q68J44 220 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 ELP2Q6IA86 826 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 LAIR2Q6ISS4 152 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 C16orf87Q6PH81 154 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 OTUD6AQ7L8S5 288 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 MICAL3Q7RTP6 2002 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 SCXQ7RTU7 201 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 MRPL21Q7Z2W9 205 aaKnown RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 MARCH3Q86UD3 253 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 COMTD1Q86VU5 262 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 C10orf107Q8IVU9 208 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 SLX4Q8IY92 1834 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 Q8NAQ8 132 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 FBXO36Q8NEA4 188 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 PROKR2Q8NFJ6 384 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 OR6K6Q8NGW6 343 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 OR51A7Q8NH64 312 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 AGR3Q8TD06 166 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 SCGB1C1Q8TD33 95 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 PDCD6IPQ8WUM4 868 aaKnown RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 TSEN15Q8WW01 171 aaKnown RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 RAD51AP1Q96B01 352 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 ZNF707Q96C28 371 aaPredicted RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 CPB2Q96IY4 423 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 YPEL4Q96NS1 127 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 QKIQ96PU8 341 aaKnown RBP eCLIP0.51□□□□□ -2.339e-9■■■■■ 40.1
SRP54-207ENST00000555535 POMKQ9H5K3 350 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 AUNIPQ9H7T9 357 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 MRPS30Q9NP92 439 aaKnown RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 DDIT4Q9NX09 232 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 CCDC88CQ9P219 2028 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 JCADQ9P266 1359 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 HEATR5BQ9P2D3 2071 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 MYO5BQ9ULV0 1848 aa0.51□□□□□ -2.33
SRP54-207ENST00000555535 C14orf166Q9Y224 244 aaKnown RBP0.51□□□□□ -2.33
SRP54-207ENST00000555535 NUMA1Q14980 2115 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 SCN9AQ15858 1988 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 SBNO1A3KN83 1393 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 PLEKHG2Q9H7P9 1386 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 NOTCH1P46531 2555 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 IGHV3-43A0A0B4J1X8 118 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 A0A1B0GU33 70 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 RBFOX3A6NFN3 312 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 ERICH4A6NGS2 130 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 ZNF860A6NHJ4 632 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 ARGFXA6NJG6 315 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 H7C2Y5 167 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 K7EN84 100 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 K7EPK0 472 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 TP53I11O14683 189 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 SPOPO43791 374 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 TRAPPC6AO75865 159 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 IGKV5-2P06315 115 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 KLK1P06870 262 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 FGF4P08620 206 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 GZMBP10144 247 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 GFAPP14136 432 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 CPMP14384 443 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 GALP22466 123 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 CALRP27797 417 aaKnown RBP0.5□□□□□ -2.33
SRP54-207ENST00000555535 CRABP1P29762 137 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 XKP51811 444 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 MLF1P58340 268 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 RPL31P62899 125 aaKnown RBP0.5□□□□□ -2.33
SRP54-207ENST00000555535 DEFA6Q01524 100 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 LRRC74AQ0VAA2 488 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 TSPAN31Q12999 210 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 WDR43Q15061 677 aaKnown RBP eCLIP0.5□□□□□ -2.33
SRP54-207ENST00000555535 RAB11BQ15907 218 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 TNXAQ16473 311 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 TMEM176BQ3YBM2 270 aaPredicted RBP0.5□□□□□ -2.33
SRP54-207ENST00000555535 CDNFQ49AH0 187 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 C6orf183Q5T699 404 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 PIP5KL1Q5T9C9 394 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 ERICH5Q6P6B1 374 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 ULK3Q6PHR2 472 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 UGT2A3Q6UWM9 527 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 Q6ZRU5 148 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 Q6ZSA8 131 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 OR2W3Q7Z3T1 314 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 LYZL2Q7Z4W2 148 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 GALNT10Q86SR1 603 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 NELFCDQ8IXH7 590 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 COMMD1Q8N668 190 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 DNAAF3Q8N9W5 541 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 ZNF738Q8NE65 137 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 OR5T3Q8NGG3 340 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 OR8K1Q8NGG5 319 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 OR52K1Q8NGK4 314 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 OR4A5Q8NH83 315 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 UBA3Q8TBC4 463 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 NT5CQ8TCD5 201 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 GPX8Q8TED1 209 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 BLNKQ8WV28 456 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 NAT6Q93015 286 aa0.5□□□□□ -2.33
SRP54-207ENST00000555535 SMARCD1Q96GM5 515 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms