RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LINC01356Q8N9X3 169 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 ZNRF1Q8ND25 227 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 FAM46BQ96A09 425 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 SLC25A46Q96AG3 418 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 SNX22Q96L94 193 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 URM1Q9BTM9 101 aaKnown RBP11.88□□□□□ -0.51
CHD8-208ENST00000555301 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 BANF2Q9H503 90 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 IFT22Q9H7X7 185 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 SPACA1Q9HBV2 294 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
CHD8-208ENST00000555301 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
CHD8-208ENST00000555301 A0A1B0GW55 424 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 K7N7A8 449 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 GEMIN2O14893 280 aaKnown RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 OR7C1O76099 320 aaPredicted RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 ECDO95905 644 aaPredicted RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 TFF1P04155 84 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 TK1P04183 234 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 MSMBP08118 114 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4L2P0CJ85 424 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4L3P0CJ86 424 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4L4P0CJ87 422 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4L5P0CJ88 424 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4L6P0CJ89 424 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4L7P0CJ90 424 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 SLC2A2P11168 524 aaPredicted RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 GABRR1P24046 479 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 SCAND1P57086 179 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 SEC61A1P61619 476 aaKnown RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 RPS27AP62979 156 aaKnown RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 SCN1BQ07699 218 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 UNC119Q13432 240 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 FAM189A2Q15884 450 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 TAF9Q16594 264 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 CYB5R2Q6BCY4 276 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 OR10K2Q6IF99 312 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 Q6P435 159 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4L9Q6RFH8 374 aaPredicted RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 OR5D13Q8NGL4 314 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 ST8SIA4Q92187 359 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 PTX4Q96A99 478 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 ISOC1Q96CN7 298 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 Q96M66 194 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 TM2D1Q9BX74 207 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DCSTAMPQ9H295 470 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 DUX4Q9UBX2 424 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 OR5V1Q9UGF6 321 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 RAB22AQ9UL26 194 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 CEPT1Q9Y6K0 416 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 OTOGQ6ZRI0 2925 aa11.87□□□□□ -0.51
CHD8-208ENST00000555301 CHD3Q12873 2000 aaKnown RBP11.87□□□□□ -0.51
CHD8-208ENST00000555301 SMIM31A0A1B0GVY4 71 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 CCDC160A6NGH7 325 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 SIRPB1O00241 398 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 PHF1O43189 567 aaPredicted RBP11.86□□□□□ -0.51
CHD8-208ENST00000555301 ZNF737O75373 536 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 SELLP14151 372 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 NDUFB7P17568 137 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 RORCP51449 518 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 IDNKQ5T6J7 187 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 C17orf107Q6ZR85 190 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 OR8H2Q8N162 312 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 NDNFQ8TB73 568 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 MSI2Q96DH6 328 aaKnown RBP11.86□□□□□ -0.51
CHD8-208ENST00000555301 NDUFA13Q9P0J0 144 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 ABRACLQ9P1F3 81 aa11.86□□□□□ -0.51
CHD8-208ENST00000555301 MYO9AB2RTY4 2548 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 LOC105371242A0A075B767 164 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 TRAV20A0A0B4J274 112 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 PPIAL4CA0A0B4J2A2 164 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 TMEM272A0A1B0GTI8 110 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 TMEM82A0PJX8 343 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 KIAA1324LA8MWY0 1029 aaPredicted RBP11.85□□□□□ -0.51
CHD8-208ENST00000555301 H3BMQ9 156 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 ZNF701M0R085 212 aaPredicted RBP11.85□□□□□ -0.51
CHD8-208ENST00000555301 SLC33A1O00400 549 aaPredicted RBP11.85□□□□□ -0.51
CHD8-208ENST00000555301 MGST3O14880 152 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 PSPNO60542 156 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 RAB6AP20340 208 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 ZFP36P26651 326 aaKnown RBP11.85□□□□□ -0.51
CHD8-208ENST00000555301 KCNJ3P48549 501 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 LCN2P80188 198 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 PDCD1Q15116 288 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 GRK1Q15835 563 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 BTN2A1Q7KYR7 527 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 KCTD12Q96CX2 325 aaKnown RBP11.85□□□□□ -0.51
CHD8-208ENST00000555301 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 LPAR5Q9H1C0 372 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 KCNK15Q9H427 330 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 LPAR2Q9HBW0 351 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 RSL24D1Q9UHA3 163 aaKnown RBP11.85□□□□□ -0.51
CHD8-208ENST00000555301 ETV7Q9Y603 341 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 TEX15Q9BXT5 2789 aa11.85□□□□□ -0.51
CHD8-208ENST00000555301 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
CHD8-208ENST00000555301 A0A0B4J203 849 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms