RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 C16orf74Q96GX8 76 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 OR10C1Q96KK4 312 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 ZIM3Q96PE6 472 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 OR4K3Q96R72 315 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 VNN3Q9NY84 501 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.62□□□□□ -1.83
VRK1-203ENST00000555067 ENPP4Q9Y6X5 453 aa3.62□□□□□ -1.83
VRK1-203ENST00000555067 MN1Q10571 1320 aaPredicted RBP3.62□□□□□ -1.83
VRK1-203ENST00000555067 IGHV6-1A0A0B4J1U7 121 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 TRAV8-2A0A0B4J237 113 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 CCL15-CCL14A0A0B4J2E2 113 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 FAM183AA6NL82 134 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 KRBOX1C9JBD0 128 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 C8orf87E5RJ46 101 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 H3BP45 60 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 CD5LO43866 347 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 STX10O60499 249 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 CNMDO75829 334 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 RPSAP08865 295 aaKnown RBP3.61□□□□□ -1.83
VRK1-203ENST00000555067 CD99P14209 185 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 OMGP23515 440 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 ZBTB25P24278 435 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 PRSS3P35030 304 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 RCVRNP35243 200 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 CTRLP40313 264 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 OMPP47874 163 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 NMUP48645 174 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 TCL1AP56279 114 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 C16orf72Q14CZ0 275 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 CCL15Q16663 113 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 AKIRIN2Q53H80 203 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 TMEM205Q6UW68 189 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 Q6ZSR6 202 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 MUC15Q8N387 334 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 DRAM1Q8N682 238 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 GPR32P1Q8NGA4 272 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 OR4P4Q8NGL7 312 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 FAM104AQ969W3 186 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 OR2M2Q96R28 347 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 DOK1Q99704 481 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 HSD17B10Q99714 261 aaKnown RBP3.61□□□□□ -1.83
VRK1-203ENST00000555067 SLC17A9Q9BYT1 436 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 SLC25A31Q9H0C2 315 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 XPNPEP1Q9NQW7 623 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 DMAC2Q9NW81 257 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 RBM12B-AS1Q9P1G2 102 aa3.61□□□□□ -1.83
VRK1-203ENST00000555067 TET2Q6N021 2002 aaPredicted RBP3.6□□□□□ -1.83
VRK1-203ENST00000555067 TRAV19A0A0A6YYK7 116 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 KLF18A0A0U1RQI7 1052 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 EPOPA6NHQ4 379 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 KCNK1O00180 336 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 TRAF3IP2O43734 574 aaPredicted RBP3.6□□□□□ -1.83
VRK1-203ENST00000555067 DCTN3O75935 186 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 CXCL5P42830 114 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 CRISP3P54108 245 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 CCL23P55773 120 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 POLR2GP62487 172 aaKnown RBP eCLIP3.6□□□□□ -1.83
VRK1-203ENST00000555067 NDPQ00604 133 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 FMODQ06828 376 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 PNOCQ13519 176 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 Q499Y3 187 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 FAM162BQ5T6X4 162 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 ZNF530Q6P9A1 599 aaPredicted RBP3.6□□□□□ -1.83
VRK1-203ENST00000555067 CCDC121Q6ZUS5 278 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 MDP1Q86V88 176 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 COMMD7Q86VX2 200 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 TGIF2LYQ8IUE0 185 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 RIMKLAQ8IXN7 391 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 UBALD2Q8IYN6 164 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 STK40Q8N2I9 435 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 SUMF2Q8NBJ7 301 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 OR10G4Q8NGN3 311 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 OR52P1PQ8NH57 321 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 ABHD3Q8WU67 409 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 PTX4Q96A99 478 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 OPTNQ96CV9 577 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 NEURL3Q96EH8 262 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 SNF8Q96H20 258 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 CHAC1Q9BUX1 264 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 MMACHCQ9Y4U1 282 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 NRCAMQ92823 1304 aa3.6□□□□□ -1.83
VRK1-203ENST00000555067 NPHP4O75161 1426 aaPredicted RBP3.6□□□□□ -1.83
VRK1-203ENST00000555067 DYSFO75923 2080 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 CENPVL3A0A0U1RRI6 287 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 LOC389332A0A1B0GUA5 103 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 ZNF705GA8MUZ8 300 aaPredicted RBP3.59□□□□□ -1.83
VRK1-203ENST00000555067 E5RI56 91 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 UPK2O00526 184 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 MFNGO00587 321 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 FFAR1O14842 300 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 CA11O75493 328 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 EPPINO95925 133 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 SERPINA1P01009 418 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 TNNC2P02585 160 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 AKR1C4P17516 323 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 CD79BP40259 229 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 SLCO1A2P46721 670 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 ZNF136P52737 540 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 SLC18A1P54219 525 aa3.59□□□□□ -1.83
VRK1-203ENST00000555067 OR4D2P58180 307 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms