RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TRAF4Q9BUZ4 470 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-212ENST00000554486 BARHL1Q9BZE3 327 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 SLC22A4Q9H015 551 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 SLITRK2Q9H156 845 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 DCSTAMPQ9H295 470 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 CXXC4Q9H2H0 198 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 OR51I2Q9H344 312 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 TPK1Q9H3S4 243 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 PLEKHA2Q9HB19 425 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 ABCB9Q9NP78 766 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 BATF3Q9NR55 127 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 CYSLTR2Q9NS75 346 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 CBLN4Q9NTU7 201 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 NDUFA13Q9P0J0 144 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 CKLFQ9UBR5 152 aa5.29□□□□□ -1.56
SCFD1-212ENST00000554486 RSL24D1Q9UHA3 163 aaKnown RBP5.29□□□□□ -1.56
SCFD1-212ENST00000554486 AK6Q9Y3D8 172 aaKnown RBP5.29□□□□□ -1.56
SCFD1-212ENST00000554486 MAP1AP78559 2803 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-212ENST00000554486 ANKRD17O75179 2603 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 IGHV3-64DA0A0J9YX35 117 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 OR5B21A6NL26 309 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 SLC22A1O15245 554 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 NOL3O60936 208 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 PTBP3O95758 552 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 IL1AP01583 271 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 ERCC1P07992 297 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 CD55P08174 381 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 HCKP08631 526 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 RAB3BP20337 219 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 LMO1P25800 156 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 SSTR2P30874 369 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 RBMXP38159 391 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 PMELP40967 661 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 CD200P41217 278 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 ATP1B3P54709 279 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 ZP1P60852 638 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 SNRPD2P62316 118 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 GNG3P63215 75 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 TNFAIP6P98066 277 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 MXD1Q05195 221 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 ZNF154Q13106 437 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 HNRNPA0Q13151 305 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 KISS1Q15726 138 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 MPPED2Q15777 294 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 FAM76BQ5HYJ3 339 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 C1orf100Q5SVJ3 147 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 AGAP6Q5VW22 663 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 PRAMEF6Q5VXH4 476 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 FAM166AQ6J272 317 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 USP43Q70EL4 1123 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 C1QL2Q7Z5L3 287 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 TPRA1Q86W33 373 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 ANGPTL5Q86XS5 388 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 TGIF2LYQ8IUE0 185 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 C11orf53Q8IXP5 236 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 SPERTQ8NA61 448 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 DDB2Q92466 427 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 NRGNQ92686 78 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 RFT1Q96AA3 541 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 OR2V2Q96R30 315 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 MICU1Q9BPX6 476 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 RTL8AQ9BWD3 113 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 QTRT1Q9BXR0 403 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 CACNG6Q9BXT2 260 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 FAM192AQ9GZU8 254 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 TLNRD1Q9H1K6 362 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 LIME1Q9H400 295 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 METTL17Q9H7H0 456 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 CHODLQ9H9P2 273 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 DYNLRB1Q9NP97 96 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 ASH1LQ9NR48 2969 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 FAIMQ9NVQ4 179 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 NKIRAS2Q9NYR9 191 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 SLC7A11Q9UPY5 501 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 LAMP3Q9UQV4 416 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 NOP16Q9Y3C1 178 aaKnown RBP5.28□□□□□ -1.56
SCFD1-212ENST00000554486 V9GY05 133 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 BAHCC1Q9P281 2608 aa5.28□□□□□ -1.56
SCFD1-212ENST00000554486 A0A0B4J203 849 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 IGKV1-12A0A0C4DH73 117 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 LRP5LA4QPB2 252 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 TMEM210A6NLX4 147 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 IFITM5A6NNB3 132 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 H7C417 338 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 J3QT63 122 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 AIPO00170 330 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 SLC17A2O00624 439 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 PDCD5O14737 125 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 MAGEB3O15480 346 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 SYNGR1O43759 233 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 IGKV1D-12P01611 117 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 CSF1P09603 554 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 OCMP0CE72 109 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-212ENST00000554486 SLC2A2P11168 524 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-212ENST00000554486 LYL1P12980 280 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 MPZP25189 248 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 ZNF93P35789 620 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-212ENST00000554486 CDKN1AP38936 164 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 PTGFRP43088 359 aa5.27□□□□□ -1.57
SCFD1-212ENST00000554486 HAAOP46952 286 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms