RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 CDK20Q8IZL9 346 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 RFLNBQ8N5W9 214 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 LRRC75AQ8NAA5 344 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 DUSP18Q8NEJ0 188 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 OR4C3Q8NH37 302 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 OR51A7Q8NH64 312 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 OR5W2Q8NH69 310 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 FGFBP3Q8TAT2 258 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 NEIL3Q8TAT5 605 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 RNF128Q8TEB7 428 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SMAP2Q8WU79 429 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNRF4Q8WWF5 429 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 AP3S1Q92572 193 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF524Q96C55 264 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 C8orf44Q96CB5 159 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF486Q96H40 463 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 PGLYRP3Q96LB9 341 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 JSRP1Q96MG2 331 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 C17orf77Q96MU5 243 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 TBX5Q99593 518 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 PARD6GQ9BYG4 376 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 VN1R1Q9GZP7 353 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC22A4Q9H015 551 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 MMP28Q9H239 520 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 PRTFDC1Q9NRG1 225 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 COMMD3Q9UBI1 195 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 RNF115Q9Y4L5 304 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 TNRC6AQ8NDV7 1962 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 TACC2O95359 2948 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SPTAN1Q13813 2472 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 CSMD2Q7Z408 3487 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 IGHV5-51A0A0C4DH38 117 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A1B0GUV1 79 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 SERINC4A6NH21 518 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 RIIAD1A6NNX1 92 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 C17orf105B2RV13 164 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 E5RGE8 158 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 LRRN3E7EW58 273 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 J3QLW9 94 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 CCL24O00175 119 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 IMPA2O14732 288 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF749O43361 778 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC19A2O60779 497 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 CCNKO75909 580 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 NDUFB2O95178 105 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 IFNA6P05013 189 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 GYPBP06028 91 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 MRPL3P09001 348 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 TRAPPC2P0DI81 140 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 TRAPPC2BP0DI82 140 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 LIFP15018 202 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 HIST1H1CP16403 213 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF19P17023 458 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ELK1P19419 428 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 HLA-DMAP28067 261 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 SRD5A2P31213 254 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 DDOSTP39656 456 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 CAPZBP47756 277 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 OR3A3P47888 321 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 EFNA3P52797 238 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 NKX2-5P52952 324 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 HCCSP53701 268 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 RPS11P62280 158 aaKnown RBP eCLIP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 RPS4XP62701 263 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 PITPNAQ00169 270 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 POU3F1Q03052 451 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 TRAM1Q15629 374 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNHIT3Q15649 155 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ATAD3CQ5T2N8 411 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC22A10Q63ZE4 541 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 HBMQ6B0K9 141 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ASCL4Q6XD76 172 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 CPEB2Q7Z5Q1 589 aaKnown RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 OAFQ86UD1 273 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF546Q86UE3 836 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 SDR9C7Q8NEX9 313 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 OR11H4Q8NGC9 324 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 OR4D9Q8NGE8 314 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 OR52E2Q8NGJ4 325 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 OR5J2Q8NH18 312 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 RPS4Y2Q8TD47 263 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 CCDC107Q8WV48 283 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ACOT12Q8WYK0 555 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 HSD17B8Q92506 261 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC7A6Q92536 515 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 SGTBQ96EQ0 304 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 PELI1Q96FA3 418 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 RNF170Q96K19 258 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ERMAPQ96PL5 475 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 GPX7Q96SL4 187 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 KLHDC3Q9BQ90 382 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF251Q9BRH9 671 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 CHRNA10Q9GZZ6 450 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 RIMS4Q9H426 269 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF701Q9NV72 531 aaPredicted RBP4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 C1orf123Q9NWV4 160 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 KLHL21Q9UJP4 597 aa4.38□□□□□ -1.71
MTHFD1-206ENST00000554353 COPS3Q9UNS2 423 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms