RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 A0A1W2PRS3 328 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 KCNK3O14649 394 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 NDUFA7O95182 113 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 C1RP00736 705 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 HPXP02790 462 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SERPINA7P05543 415 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SLC35G6P0C7Q6 338 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 LYL1P12980 280 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 HOXB4P17483 251 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ATF1P18846 271 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 IER3P46695 156 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 HIST1H1AQ02539 215 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 HSD52Q0P140 79 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ZNF345Q14585 488 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TSNQ15631 228 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TMEM52BQ4KMG9 183 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TMEM215Q68D42 235 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CNIH2Q6PI25 160 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ZNF788Q6ZQV5 615 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 C1QL2Q7Z5L3 287 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ZNF114Q8NC26 417 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SLC25A43Q8WUT9 341 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CENPNQ96H22 339 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 GMPPAQ96IJ6 420 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 LINC00477Q96M19 166 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CABLES2Q9BTV7 478 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 WDR61Q9GZS3 305 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 IFI27L2Q9H2X8 130 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ACP6Q9NPH0 428 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CLCF1Q9UBD9 225 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 RALYQ9UKM9 306 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SH2B3Q9UQQ2 575 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 LRP5LA4QPB2 252 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 C3orf70A6NLC5 250 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 M0QZQ0 153 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TMPRSS2O15393 492 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ESR1P03372 595 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CSN3P07498 182 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SNRPBP14678 240 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 USF1P22415 310 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 NFYAP23511 347 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CFPP27918 469 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 S100A2P29034 98 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 LHX2P50458 406 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PRR30Q53SZ7 412 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PAQR6Q6TCH4 344 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PTGR2Q8N8N7 351 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TMEM106AQ96A25 262 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 GABRG3Q99928 467 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 MMP26Q9NRE1 261 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TPSG1Q9NRR2 321 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 RNF114Q9Y508 228 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TNS2Q63HR2 1409 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ANKRD36A6QL64 1941 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 NHSQ6T4R5 1651 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 A0A087X0K7 114 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PNMA8CA0A1B0GUJ8 204 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ZNF593O00488 134 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SSNA1O43805 119 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PRAF2O60831 178 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PITX3O75364 302 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 MOSP00540 346 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 IGHG1P01857 330 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 UCHL1P09936 223 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 IGLC2P0DOY2 106 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 IGLC3P0DOY3 106 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CMPK1P30085 196 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PYCR1P32322 319 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 APOBEC1P41238 236 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 STC1P52823 247 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TAS2R50P59544 299 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 RPS15AP62244 130 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 MEF2CQ06413 473 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TRAF3Q13114 568 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 EXOSC7Q15024 291 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 OR8B8Q15620 311 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SSX1Q16384 188 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ATP6AP1LQ52LC2 224 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ARL9Q6T311 187 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TMEM178AQ8NBL3 297 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 NDRG1Q92597 394 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 GRAMD2BQ96HH9 432 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 FLRT3Q9NZU0 649 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 TRAV8-6A0A0B4J262 113 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 LOC107986453A0A1B0GWG9 222 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 C7orf77A4D0Y5 90 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 RAB27BO00194 218 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SYT7O43581 403 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 LILRA1O75019 489 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 WBP4O75554 376 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CNMDO75829 334 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 CDS2O95674 445 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 PRSS56P0CW18 603 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 IRF1P10914 325 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ELK3P41970 407 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 WNT3AP56704 352 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 SESN2P58004 480 aaPredicted RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 WDR5P61964 334 aaKnown RBP3.3□□□□□ -1.88
LRFN5-204ENST00000554171 ID3Q02535 119 aa3.3□□□□□ -1.88
LRFN5-204ENST00000554171 Q0VG73 95 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms