RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 ZNF714Q96N38 554 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 FKBP14Q9NWM8 211 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 ERVK13-1Q9NX77 482 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 MTCH1Q9NZJ7 389 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 OR14J1Q9UGF5 321 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 PITPNC1Q9UKF7 332 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 TCF19Q9Y242 345 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 LRRC42Q9Y546 428 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 LINC00312Q9Y6C7 94 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 MINOS1-NBL1R4GNA1 71 aa5.35□□□□□ -1.55
SLIRP-203ENST00000554074 LOC107986453A0A1B0GWG9 222 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 FAM230AA0A1W2PPH8 454 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 hADV38S2A0JD32 116 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 TMEM82A0PJX8 343 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 A6NDX4 124 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 A6NIN4 97 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 F8VVB4 439 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 F8VWA3 439 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 CHST1O43916 411 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 HAND1O96004 215 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 CYB5AP00167 134 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 OPN1MWP04001 364 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ARG1P05089 322 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 CD1AP06126 327 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 OPN1MW2P0DN77 364 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 OPN1MW3P0DN78 364 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 PRKACBP22694 351 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 COX7A1P24310 79 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ERP29P30040 261 aaKnown RBP5.34□□□□□ -1.55
SLIRP-203ENST00000554074 RBP2P50120 134 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 GBX2P52951 348 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ATP1B3P54709 279 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 GABARAPL2P60520 117 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 BDH1Q02338 343 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF85Q03923 595 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ST3GAL4Q11206 333 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 LY6EQ16553 131 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 SPIN3Q5JUX0 258 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 KPRPQ5T749 579 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-203ENST00000554074 TMEM244Q5VVB8 128 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ZNF782Q6ZMW2 699 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-203ENST00000554074 SLC25A26Q70HW3 274 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 TCF23Q7RTU1 214 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 PRSS48Q7RTY5 328 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 LHFPL4Q7Z7J7 247 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 PRSS35Q8N3Z0 413 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 STX19Q8N4C7 294 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 KLHDC1Q8N7A1 406 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 BPIFB6Q8NFQ5 453 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 OR2G2Q8NGZ5 317 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 TRMT10AQ8TBZ6 339 aaKnown RBP5.34□□□□□ -1.55
SLIRP-203ENST00000554074 WIPF2Q8TF74 440 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-203ENST00000554074 THRSPQ92748 146 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 SLAMF9Q96A28 289 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 SPSB1Q96BD6 273 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 TBX5Q99593 518 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ALG8Q9BVK2 526 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 DUSP21Q9H596 190 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 RHOFQ9HBH0 211 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 SERTAD4Q9NUC0 356 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 GLS2Q9UI32 602 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 ERGIC3Q9Y282 383 aa5.34□□□□□ -1.55
SLIRP-203ENST00000554074 UBE2J1Q9Y385 318 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-203ENST00000554074 IGKV1-9A0A0C4DH69 117 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 FUOMA2VDF0 154 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 TMEM212A6NML5 194 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 FAM90A22PA8MWA6 464 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 H3BUI4 141 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 MGST3O14880 152 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 ALX3O95076 343 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 MT-ND2P03891 347 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 ALDOBP05062 364 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 CDK1P06493 297 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 HTR1AP08908 422 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 LIMS3P0CW19 117 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 LIMS4P0CW20 117 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 ATF1P18846 271 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 CRHBPP24387 322 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 AZGP1P25311 298 aaKnown RBP5.33□□□□□ -1.56
SLIRP-203ENST00000554074 LMO1P25800 156 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 KIR3DL2P43630 455 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 MTCP1P56278 107 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 EDDM3BP56851 147 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 SLC35A2P78381 396 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 GPR50Q13585 617 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 SMN1Q16637 294 aaKnown RBP5.33□□□□□ -1.56
SLIRP-203ENST00000554074 ODF4Q2M2E3 257 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 LDLRAD2Q5SZI1 272 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 LAIR2Q6ISS4 152 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 RPL22L1Q6P5R6 122 aaKnown RBP5.33□□□□□ -1.56
SLIRP-203ENST00000554074 CCBE1Q6UXH8 406 aaPredicted RBP5.33□□□□□ -1.56
SLIRP-203ENST00000554074 LHFPL2Q6ZUX7 228 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 C16orf82Q7Z2V1 217 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 SAXO1Q8IYX7 474 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 FAM58AQ8N1B3 248 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 DYNAPQ8N1N2 210 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 FAM110DQ8TAY7 271 aaPredicted RBP5.33□□□□□ -1.56
SLIRP-203ENST00000554074 CORO2AQ92828 525 aa5.33□□□□□ -1.56
SLIRP-203ENST00000554074 EMG1Q92979 244 aaKnown RBP5.33□□□□□ -1.56
SLIRP-203ENST00000554074 CNBD2Q96M20 576 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms