RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 AQP12BA6NM10 295 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF732B4DXR9 585 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 H0YAE9 185 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 C3orf84H3BNL1 204 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 LY6LH3BQJ8 138 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF593O00488 134 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 XKRYO14609 159 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 MRASO14807 208 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 SELENOFO60613 162 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 EDF1O60869 148 aaKnown RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 ZNF737O75373 536 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 SRSF10O75494 262 aaKnown RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 CST4P01036 141 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 ARG1P05089 322 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 CALCBP10092 127 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 SPI1P17947 270 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 GLRA1P23415 457 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 EEF1B2P24534 225 aaKnown RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OPRL1P41146 370 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 VDAC2P45880 294 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 CX3CR1P49238 355 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 GSK3BP49841 420 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 DYNLT3P51808 116 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 FAM3BP58499 235 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 ERVK11-1P61568 191 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 IL5RAQ01344 420 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 LIPEQ05469 1076 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 DGCR6Q14129 220 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 KIAA0141Q14154 515 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 CRMP1Q14194 572 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 KRT72Q14CN4 511 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 AANATQ16613 207 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 ABCA11PQ4W5N1 156 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 IFI44LQ53G44 452 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 LRRC10Q5BKY1 277 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 GPR139Q6DWJ6 353 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 SMARCD3Q6STE5 483 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 DRAM2Q6UX65 266 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 SLC36A1Q7Z2H8 476 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 SMIM29Q86T20 159 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 CALHM1Q8IU99 346 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 TIGD4Q8IY51 512 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 TMEM185AQ8NFB2 350 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR2T12Q8NG77 320 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR4F17Q8NGA8 305 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR4S1Q8NGB4 309 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR11H6Q8NGC7 330 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR8B12Q8NGG6 310 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR4C15Q8NGM1 316 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR10Z1Q8NGY1 313 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR2T27Q8NH04 317 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 MUC7Q8TAX7 377 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 RNF133Q8WVZ7 376 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 AQP3Q92482 292 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 PIGCQ92535 297 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 C12orf43Q96C57 262 aaKnown RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 RCN3Q96D15 328 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 MAGEB18Q96M61 343 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 OR4F4Q96R69 305 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 SLC25A33Q9BSK2 321 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 FNDC11Q9BVV2 318 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 TMEM120AQ9BXJ8 343 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 NPFFR1Q9GZQ6 430 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 HES4Q9HCC6 221 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 CENPMQ9NSP4 180 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 ARMC1Q9NVT9 282 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 KIAA1456Q9P272 454 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 BAG5Q9UL15 447 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 COPS3Q9UNS2 423 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 POLR1DQ9Y2S0 133 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 TSSC4Q9Y5U2 329 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-202ENST00000553981 V9GYQ6 96 aa2.44□□□□□ -2.02
SLIRP-202ENST00000553981 IGHV4-28A0A0C4DH34 117 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 A0A1B0GTI1 187 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 BTBD17A6NE02 478 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A18PA6NE21 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A16PA6NEW6 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A20PA6NIJ5 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TRIM64CA6NLI5 447 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A9PA6NNJ1 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A12PA8MX19 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A5PA8MXJ8 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 H3BSH0 61 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 ANGPT2O15123 496 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 XRCC2O43543 280 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 PAHP00439 452 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 IGLV1-47P01700 117 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 HLA-DQA2P01906 255 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TK1P04183 234 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 IFNW1P05000 195 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 H1F0P07305 194 aaKnown RBP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 SPARCP09486 303 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A15PP0C7V4 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 FAM90A14PP0C7W9 464 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 PGA5P0DJD9 388 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 IGHV1-8P0DP01 117 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 TROVE2P10155 538 aaKnown RBP eCLIP2.43□□□□□ -2.02
SLIRP-202ENST00000553981 NR2C1P13056 603 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 POU1F1P28069 291 aa2.43□□□□□ -2.02
SLIRP-202ENST00000553981 CRABP1P29762 137 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms