RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 METAP1DQ6UB28 335 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-209ENST00000553949 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 ZNRF1Q8ND25 227 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 C1orf159Q96HA4 380 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 COX4I2Q96KJ9 171 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 Q96M66 194 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 SSBP3Q9BWW4 388 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-209ENST00000553949 TMEM59Q9BXS4 323 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 BARHL1Q9BZE3 327 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 CLN8Q9UBY8 286 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 OR5V1Q9UGF6 321 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 RSL24D1Q9UHA3 163 aaKnown RBP10.18□□□□□ -0.78
SHMT2-209ENST00000553949 TMEM82A0PJX8 343 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 FAM157AC9JC47 383 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF701M0R085 212 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 SIRPB1O00241 398 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF737O75373 536 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 FCN3O75636 299 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 OR7C1O76099 320 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 PAHP00439 452 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 SNRPBP14678 240 aaKnown RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF44P15621 663 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 GABRR1P24046 479 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 LMO1P25800 156 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 NPY4RP50391 375 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 RORCP51449 518 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 SCAND1P57086 179 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 GNB2P62879 340 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 PLA2G7Q13093 441 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 TMEM249Q2WGJ8 235 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 LRRC10Q5BKY1 277 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 WDR25Q64LD2 544 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 FGFRL1Q8N441 504 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 ASCC1Q8N9N2 400 aaKnown RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 CHST4Q8NCG5 386 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 TMEM185AQ8NFB2 350 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 LGALS14Q8TCE9 139 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 URM1Q9BTM9 101 aaKnown RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 MRI1Q9BV20 369 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 TM2D1Q9BX74 207 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 FAM234AQ9H0X4 552 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 LPAR5Q9H1C0 372 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 IFT22Q9H7X7 185 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 NDUFA13Q9P0J0 144 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF581Q9P0T4 197 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 ABRACLQ9P1F3 81 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 SLC25A10Q9UBX3 287 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 RAB22AQ9UL26 194 aa10.17□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF469Q96JG9 3925 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-209ENST00000553949 TRAV24A0A0B4J272 114 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A10PA6NDY2 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A18PA6NE21 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A16PA6NEW6 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A20PA6NIJ5 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A8PA6NJQ4 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A7PA6NKC0 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A22PA8MWA6 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 KIAA1324LA8MWY0 1029 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A12PA8MX19 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A5PA8MXJ8 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 A8MXK9 166 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A23PA8MXZ1 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 K7N7A8 449 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 SLC33A1O00400 549 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-209ENST00000553949 PHF1O43189 567 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-209ENST00000553949 PSPNO60542 156 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FOXH1O75593 365 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 TK1P04183 234 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A15PP0C7V4 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A13PP0C7W8 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A14PP0C7W9 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 FAM90A24PP0C7X0 464 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 RAB6AP20340 208 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 ZFP36P26651 326 aaKnown RBP10.16□□□□□ -0.78
SHMT2-209ENST00000553949 OR3A1P47881 315 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 EFNB2P52799 333 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 C17orf107Q6ZR85 190 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 LINC01356Q8N9X3 169 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 OR5H6Q8NGV6 325 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 PPP1R35Q8TAP8 253 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 ST8SIA4Q92187 359 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 PTX4Q96A99 478 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 POM121Q96HA1 1249 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 C18orf12Q96KH6 178 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 SNX22Q96L94 193 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 NICN1Q9BSH3 213 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 TMUB1Q9BVT8 246 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 CHST6Q9GZX3 395 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 SHARPINQ9H0F6 387 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 ETV7Q9Y603 341 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 ITPR3Q14573 2671 aa10.16□□□□□ -0.78
SHMT2-209ENST00000553949 A0A0A6YYD4 124 aa10.15□□□□□ -0.78
SHMT2-209ENST00000553949 B4DSR2 109 aa10.15□□□□□ -0.78
SHMT2-209ENST00000553949 H3BUI4 141 aa10.15□□□□□ -0.78
SHMT2-209ENST00000553949 HSPB6O14558 160 aa10.15□□□□□ -0.78
SHMT2-209ENST00000553949 GPR37O15354 613 aa10.15□□□□□ -0.78
SHMT2-209ENST00000553949 MSMBP08118 114 aa10.15□□□□□ -0.78
SHMT2-209ENST00000553949 IGHV4-31P0DP07 118 aa10.15□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF182P17025 639 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-209ENST00000553949 NDUFB7P17568 137 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms