RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TRBV2A0A0J9YWF9 115 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A18PA6NE21 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A16PA6NEW6 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A20PA6NIJ5 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A9PA6NNJ1 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 SERPINE3A8MV23 424 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A12PA8MX19 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A5PA8MXJ8 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 CCL24O00175 119 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 TOR1AO14656 332 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 E2F6O75461 281 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 RPP14O95059 124 aaKnown RBP7.15□□□□□ -1.26
SYNE2-209ENST00000553308 CST1P01037 141 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A15PP0C7V4 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A13PP0C7W8 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A14PP0C7W9 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM90A24PP0C7X0 464 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM106CPP0CH98 169 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 PRKACAP17612 351 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 POU3F4P49335 361 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FUT6P51993 359 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 MS4A2Q01362 244 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 AESQ08117 197 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 GK3PQ14409 553 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF146Q15072 292 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 CCDC144NLQ6NUI1 221 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 LCNL1Q6ZST4 164 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 BCDIN3DQ7Z5W3 292 aaKnown RBP7.15□□□□□ -1.26
SYNE2-209ENST00000553308 SLC35F2Q8IXU6 374 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 Q8IYB0 196 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 ENTHD1Q8IYW4 607 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 FAM58AQ8N1B3 248 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 TOMM40LQ969M1 308 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 CREB3L1Q96BA8 519 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 BORCS8Q96FH0 119 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 CHST5Q9GZS9 411 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF446Q9NWS9 450 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 NDE1Q9NXR1 346 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 ING3Q9NXR8 418 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 TAS2R3Q9NYW6 316 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 MRM2Q9UI43 246 aaKnown RBP7.15□□□□□ -1.26
SYNE2-209ENST00000553308 SNX5Q9Y5X3 404 aa7.15□□□□□ -1.26
SYNE2-209ENST00000553308 A0A087X0M5 115 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 A0A1B0GX30 115 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 A0A1W2PPI3 338 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 LINC01548A6NM66 108 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 OOSP1A8MZH6 123 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 M0R129 80 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 SYT7O43581 403 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 PRKYO43930 277 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 SNX3O60493 162 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 GATBO75879 557 aaKnown RBP7.14□□□□□ -1.27
SYNE2-209ENST00000553308 OR2H2O95918 312 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 IGHV3-7P01780 117 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 RPLP1P05386 114 aaKnown RBP7.14□□□□□ -1.27
SYNE2-209ENST00000553308 RAP2AP10114 183 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 TMEM11P17152 192 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 PRKACGP22612 351 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 CHATP28329 748 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 PTGFRP43088 359 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 PRRX1P54821 245 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 GP2P55259 537 aaKnown RBP7.14□□□□□ -1.27
SYNE2-209ENST00000553308 SLC35B1P78383 322 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 DIAPH2-AS1Q14236 149 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 HES1Q14469 280 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 HNF4GQ14541 408 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 KPNB1Q14974 876 aaKnown RBP7.14□□□□□ -1.27
SYNE2-209ENST00000553308 C17orf58Q2M2W7 97 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 SPIN3Q5JUX0 258 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 C9orf66Q5T8R8 295 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 SSX6Q7RTT6 188 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 SLC35E3Q7Z769 313 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 THNSL2Q86YJ6 484 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 STPG2Q8N412 459 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 COMMD1Q8N668 190 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 DRAM1Q8N682 238 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 Q8NFD4 153 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 OR4D6Q8NGJ1 314 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 OR5M8Q8NGP6 311 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 CORO2AQ92828 525 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 RPEQ96AT9 228 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 COQ2Q96H96 371 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 RCHY1Q96PM5 261 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 ZNF556Q9HAH1 456 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 ADGRL4Q9HBW9 690 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 EXOSC4Q9NPD3 245 aaKnown RBP7.14□□□□□ -1.27
SYNE2-209ENST00000553308 GLS2Q9UI32 602 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 SCOCQ9UIL1 159 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 GSTK1Q9Y2Q3 226 aa7.14□□□□□ -1.27
SYNE2-209ENST00000553308 IGKV1-9A0A0C4DH69 117 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 IGKV1-12A0A0C4DH73 117 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 LCE6AA0A183 80 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 ODAMA1E959 279 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 SEC14L6B5MCN3 397 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 ZNF670-ZNF695F2Z2N8 137 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 GNGT2O14610 69 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 SH2D1BO14796 132 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 FGF16O43320 207 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 IGKV1D-12P01611 117 aa7.13□□□□□ -1.27
SYNE2-209ENST00000553308 IGHG2P01859 326 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms