RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 COX5AP20674 150 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 FCGR2CP31995 323 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 RBMXP38159 391 aaKnown RBP11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 UBA52P62987 128 aaKnown RBP11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 TSC22D1Q15714 1073 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 SRSF7Q16629 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 COMMD7Q86VX2 200 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 TOMM40LQ969M1 308 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 PIK3IP1Q96FE7 263 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 PKIBQ9C010 78 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 OR51I2Q9H344 312 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 BCL2L11O43521 198 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 SPDEFO95238 335 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 NAPSAO96009 420 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 RRASP10301 218 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 CBR1P16152 277 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 UCP3P55916 312 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 LINC00596Q86U02 117 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 POC1AQ8NBT0 407 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 INO80EQ8NBZ0 244 aaPredicted RBP11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 C1orf162Q8NEQ5 155 aaPredicted RBP11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 CCDC120Q96HB5 630 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF488Q96MN9 340 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 OR2J1Q9GZK6 312 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 PLSCR4Q9NRQ2 329 aa11.98□□□□□ -0.49
RAB3IP-216ENST00000552199 ESPL1Q14674 2120 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 HOXB5P09067 269 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 DUSP1P28562 367 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 GLP1RP43220 463 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 PIGPP57054 158 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 FXYD4P59646 89 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 FOXF2Q12947 444 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 IL15RAQ13261 267 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 BEX5Q5H9J7 111 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 FAM58AQ8N1B3 248 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 WDR31Q8NA23 367 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 ST8SIA2Q92186 375 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 Q9N2K0 584 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 DKK4Q9UBT3 224 aa11.97□□□□□ -0.49
RAB3IP-216ENST00000552199 H0YIZ8 118 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 J3QT63 122 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 NMBP08949 121 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 LYL1P12980 280 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 RAC2P15153 192 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 SPINK2P20155 84 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 UCP2P55851 309 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 ERVS71-1P61550 626 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 RBM39Q14498 530 aaKnown RBP11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 IL13RA2Q14627 380 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 ABCA11PQ4W5N1 156 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 ZNF585AQ6P3V2 769 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 SLC25A40Q8TBP6 338 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 DCUN1D4Q92564 292 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 RTL8AQ9BWD3 113 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 SPACA1Q9HBV2 294 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 KCNIP3Q9Y2W7 256 aa11.96□□□□□ -0.49
RAB3IP-216ENST00000552199 RLN2P04090 185 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 AADACP22760 399 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 HOXC12P31275 282 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 IGFBP7Q16270 282 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 IGSF11Q5DX21 431 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 FAM76BQ5HYJ3 339 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 RGS7BPQ6MZT1 257 aaPredicted RBP11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 PRSS54Q6PEW0 395 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 SLC38A6Q8IZM9 456 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 SUMF2Q8NBJ7 301 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 OR1J1Q8NGS3 322 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 RSRP1Q9BUV0 290 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 C1QTNF6Q9BXI9 259 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 NAA60Q9H7X0 242 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 RHOFQ9HBH0 211 aa11.96□□□□□ -0.5
RAB3IP-216ENST00000552199 LRP5LA4QPB2 252 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 IQCF6A8MYZ5 107 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 KCNAB3O43448 404 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 RHBDL1O75783 438 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 TNFSF13O75888 250 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 AGFG2O95081 481 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 IGKV3-15P01624 115 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 GLAP06280 429 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 SELEP16581 610 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 HERV-K104P61576 105 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 TMEM187Q14656 261 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 Q6ZS92 163 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 NEK7Q8TDX7 302 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 RTN4IP1Q8WWV3 396 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 GTF3AQ92664 365 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 GALNT14Q96FL9 552 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 LRFN3Q9BTN0 628 aa11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 RIF1Q5UIP0 2472 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-216ENST00000552199 CACNA1GO43497 2377 aa11.94□□□□□ -0.5
RAB3IP-216ENST00000552199 KLK10O43240 276 aa11.94□□□□□ -0.5
RAB3IP-216ENST00000552199 CGAP01215 116 aa11.94□□□□□ -0.5
RAB3IP-216ENST00000552199 PPYP01298 95 aa11.94□□□□□ -0.5
RAB3IP-216ENST00000552199 EIF2S3P41091 472 aaKnown RBP11.94□□□□□ -0.5
RAB3IP-216ENST00000552199 P2RX3P56373 397 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms