RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 TGIF2LXQ8IUE1 241 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 OR8H3Q8N146 312 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 OR6Q1Q8NGQ2 317 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 OR1N2Q8NGR9 330 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 EMG1Q92979 244 aaKnown RBP11.93□□□□□ -0.5
CACNB3-220ENST00000551716 SPATA25Q9BR10 227 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 GHITMQ9H3K2 345 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 KRT84Q9NSB2 600 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 ARMC1Q9NVT9 282 aa11.93□□□□□ -0.5
CACNB3-220ENST00000551716 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 FAM230AA0A1W2PPH8 454 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 FAM172BPA6NC97 362 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 PRR23D1E9PI22 279 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-220ENST00000551716 PRODHO43272 600 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 CCNB2O95067 398 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 PRR23D2P0DMB1 279 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-220ENST00000551716 SPNP16150 400 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 PTGFRP43088 359 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 POU3F4P49335 361 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 ZNF616Q08AN1 781 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 MADCAM1Q13477 382 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 SPIN3Q5JUX0 258 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 C16orf89Q6UX73 402 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 LHFPL2Q6ZUX7 228 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 AQP11Q8NBQ7 271 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 HAVCR2Q8TDQ0 301 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 ABCG5Q9H222 651 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 ISYNA1Q9NPH2 558 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 LIN7CQ9NUP9 197 aaKnown RBP11.92□□□□□ -0.5
CACNB3-220ENST00000551716 KLHDC2Q9Y2U9 406 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 V9GYS6 101 aa11.92□□□□□ -0.5
CACNB3-220ENST00000551716 LINC01548A6NM66 108 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 NCBP2LA6PVI3 153 aaKnown RBP11.91□□□□□ -0.5
CACNB3-220ENST00000551716 A8MZ25 164 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 SAP30O75446 220 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 SASH3O75995 380 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 SOX14O95416 240 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 CYB5AP00167 134 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 VDAC1P21796 283 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 OR3A1P47881 315 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 FUT6P51993 359 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 PSME3P61289 254 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 RUNX1Q01196 453 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 ROM1Q03395 351 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 ZNF91Q05481 1191 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 ZNF146Q15072 292 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 SLC35D3Q5M8T2 416 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 ZNF679Q8IYX0 411 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 TEX47Q8TBZ9 253 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 ASB17Q8WXJ9 295 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 SLAMF9Q96A28 289 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 UBE2E2Q96LR5 201 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 CHCHD6Q9BRQ6 235 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 DGCR6LQ9BY27 220 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 CADM1Q9BY67 442 aaKnown RBP11.91□□□□□ -0.5
CACNB3-220ENST00000551716 YIPF3Q9GZM5 350 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 SPAG4Q9NPE6 437 aa11.91□□□□□ -0.5
CACNB3-220ENST00000551716 TRIM64CA6NLI5 447 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 OVOL1O14753 267 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 SH2D1BO14796 132 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 MPZL2O60487 215 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 IGKV1D-33P01593 117 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 IGKV1-33P01594 117 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 PSMB8P28062 276 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 RIDAP52758 137 aaKnown RBP11.9□□□□□ -0.5
CACNB3-220ENST00000551716 EBI3Q14213 229 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 SLC25A26Q70HW3 274 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 LYPD6Q86Y78 171 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 FAM58AQ8N1B3 248 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 OR14K1Q8NGZ2 314 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 ST6GALNAC6Q969X2 333 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 MOB1AQ9H8S9 216 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 MAGEL2Q9UJ55 1249 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 TMEM14AQ9Y6G1 99 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 U3KQV3 271 aa11.9□□□□□ -0.5
CACNB3-220ENST00000551716 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-220ENST00000551716 HMGB1P1B2RPK0 211 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-220ENST00000551716 J3QR06 171 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 SLC25A17O43808 307 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 TTRP02766 147 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 NFYBP25208 207 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 GDNFP39905 211 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 KIR3DL2P43630 455 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 ACTR3P61158 418 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 ISL1P61371 349 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 TMEM65Q6PI78 240 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 Q6ZSR3 168 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 SGPP2Q8IWX5 399 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 ZNF565Q8N9K5 539 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 EME1Q96AY2 570 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 NSMCE2Q96MF7 247 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 C19orf73Q9NVV2 129 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 OR6C3Q9NZP0 311 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 ZNF580Q9UK33 172 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
CACNB3-220ENST00000551716 TRBV2A0A0J9YWF9 115 aa11.88□□□□□ -0.51
CACNB3-220ENST00000551716 ODAMA1E959 279 aa11.88□□□□□ -0.51
CACNB3-220ENST00000551716 LOC110117498-PIK3R3F6TDL0 507 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms