RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TOX3O15405 576 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 OR8B12Q8NGG6 310 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 PAM16Q9Y3D7 125 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 ZNF891A8MT65 544 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 SOX15O60248 233 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 GPM6AP51674 278 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 INSM1Q01101 510 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 CEACAM16Q2WEN9 425 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 OR10C1Q96KK4 312 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 PRSS27Q9BQR3 290 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 MANBALQ9NQG1 85 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 ZNF391Q9UJN7 358 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 ZMIZ1Q9ULJ6 1067 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 GALR2O43603 387 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 SYNGR2O43760 224 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 ZNF253O75346 499 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 C19orf35Q6ZS72 473 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 MCHR2Q969V1 340 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 WFDC6Q9BQY6 131 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 SLC26A1Q9H2B4 701 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 ZNF552Q9H707 407 aaPredicted RBP13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 FOCADQ5VW36 1801 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 METTL12A8MUP2 240 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 ATP6V1FQ16864 119 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 ABLIM2Q6H8Q1 611 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 LINC00469Q8N7U9 141 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 CYB561D1Q8N8Q1 229 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 OR10G8Q8NGN5 311 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 HIST1H2BAQ96A08 127 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 COX14Q96I36 57 aa13.98□□□□□ -0.17
RBFOX1-212ENST00000550418 FAM186AA6NE01 2351 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 GREB1LQ9C091 1923 aaPredicted RBP13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 ALPK2Q86TB3 2170 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 GYPAP02724 150 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 SRFP11831 508 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 CDX1P47902 265 aaPredicted RBP13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 BPIFB3P59826 476 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 STARD4Q96DR4 205 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 GOLGB1Q14789 3259 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 GNG4P50150 75 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 B2MP61769 119 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 UBALD1Q8TB05 177 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 TMEM147Q9BVK8 224 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 GPR61Q9BZJ8 451 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 DOK5Q9P104 306 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 MRPS18BQ9Y676 258 aaKnown RBP13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 TCF21O43680 179 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 PIAS2O75928 621 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 SELEP16581 610 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 OR8B8Q15620 311 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 CD226Q15762 336 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 STUMQ69YW2 141 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 TBC1D26Q86UD7 250 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 LRP11Q86VZ4 500 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 ZNRF4Q8WWF5 429 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 TBX15Q96SF7 602 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 FOXB1Q99853 325 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 COMMD5Q9GZQ3 224 aa13.97□□□□□ -0.17
RBFOX1-212ENST00000550418 LPAR6P43657 344 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 RAC1P63000 192 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 DUSP2Q05923 314 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 RPEL1Q2QD12 228 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 IFI44Q8TCB0 444 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 MRGPRX1Q96LB2 322 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 METTL1Q9UBP6 276 aaKnown RBP13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 CACNA1GO43497 2377 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 SERTM2A0A1B0GWG4 89 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 A0A1W2PPC1 479 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 SHISA3A0PJX4 238 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 BMP5P22003 454 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 ZP1P60852 638 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 COL5A1-AS1Q5SY13 56 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 ZPLD1Q8TCW7 415 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 VSTM2LQ96N03 204 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 DNAJC13O75165 2243 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 CENPVL1A0A0U1RR11 272 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 MDKP21741 143 aaPredicted RBP13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 ERHP84090 104 aaKnown RBP13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 CEBPEQ15744 281 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 TSEN54Q7Z6J9 526 aaKnown RBP13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 OIT3Q8WWZ8 545 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 ANGPTL4Q9BY76 406 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 COLQQ9Y215 455 aaPredicted RBP13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 KCNK7Q9Y2U2 307 aa13.96□□□□□ -0.17
RBFOX1-212ENST00000550418 C11orf94C9JXX5 98 aa13.96□□□□□ -0.18
RBFOX1-212ENST00000550418 MMP16P51512 607 aa13.96□□□□□ -0.18
RBFOX1-212ENST00000550418 PAX5Q02548 391 aa13.96□□□□□ -0.18
RBFOX1-212ENST00000550418 FOXO1Q12778 655 aa13.96□□□□□ -0.18
RBFOX1-212ENST00000550418 MOB1BQ7L9L4 216 aa13.96□□□□□ -0.18
RBFOX1-212ENST00000550418 KLHDC2Q9Y2U9 406 aa13.96□□□□□ -0.18
RBFOX1-212ENST00000550418 C1QL1O75973 258 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 KIR3DL2P43630 455 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 TMEM196Q5HYL7 178 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 LINC00696Q6ZRV3 163 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 APOBEC3DQ96AK3 386 aaPredicted RBP13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 TREM2Q9NZC2 230 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 NKX2-6A6NCS4 301 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 TNFSF11O14788 317 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 HLA-DRB5Q30154 266 aa13.95□□□□□ -0.18
RBFOX1-212ENST00000550418 ATRAIDQ6UW56 229 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms